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SCNpilot_expt_1000_bf_scaffold_5073_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10901..11680)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AIR90657.1}; TaxID=157783 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cremoricolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 240.0
  • Bit_score: 249
  • Evalue 4.40e-63
Alpha-dehydro-beta-deoxy-D-glucarate aldolase n=1 Tax=Mesorhizobium sp. LSJC264A00 RepID=V7FA08_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 250.0
  • Bit_score: 212
  • Evalue 4.20e-52
4-hydroxy-2-oxovalerate aldolase similarity KEGG
DB: KEGG
  • Identity: 40.1
  • Coverage: 232.0
  • Bit_score: 177
  • Evalue 6.20e-42

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Taxonomy

Pseudomonas cremoricolorata → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 780
ATGTCACTTCCCCTGGCCAAGCGCCTGAAAGCGCAGCTTTCCGCCGAAAAGCCTGTCTTCGGCACCTGGGTTGGAATTCCCCATCCCATCGTCATCGAACTGACGGCGCGGGCGGGGTTCGATTTCCTGCTCCTCGACGGCGAGCATTCGCCGATCGACGTGAACGCGCTCGCAAGCCTGCTGCCGGCGGCCGAACTGCACGGCGCGCCGACCATCTTCCGCACGCGCTGGAAAACGCCGGACGACATCAAGGCGGCGCTCGATGCGGGCGTCTCCGGCATCATGGTGCCGATGATCGAGAGTGCGGAGGAAGCCCGCACCGTCGTTTCCCATTGCCGGTATGCCCCGGCGGGCACGCGCGGCATCGGCCCCTGGCGCGCCTCGGGCTACTATGACGACTTCGGGGCCTATCTCGCGGACGCCAACGACGCGACGACGCTGATCCTGCAGCTCGAAAGCGGGCAGGGGCTCGCCAATGTCGAGGAGATCCTCGCCGTGGAGGGCTTCGACGTCCTGTTCGTCGGGCCCGCCGACCTCGCAAGCTCCCTCGGGCTGCCGATCGGCCGCTTCGACGGCGAGTTGCGCGGTGTGCTGGCGCGCGTCGCGGAGGCCGCGAGAAAGGCCGGAAAGCGCGCCGCCATCGATGCGCCGAACACGTCCCTCATTCCCGATCTGATCGATATGGGCTATTCGCTTTTCACGGTCGGCTCCGACATGGGCTTCATCCAGGCATCCGGACGCAGCCTTGTCGGTGAACTGGCCGCCATCGCGGAAAGGTAG
PROTEIN sequence
Length: 260
MSLPLAKRLKAQLSAEKPVFGTWVGIPHPIVIELTARAGFDFLLLDGEHSPIDVNALASLLPAAELHGAPTIFRTRWKTPDDIKAALDAGVSGIMVPMIESAEEARTVVSHCRYAPAGTRGIGPWRASGYYDDFGAYLADANDATTLILQLESGQGLANVEEILAVEGFDVLFVGPADLASSLGLPIGRFDGELRGVLARVAEAARKAGKRAAIDAPNTSLIPDLIDMGYSLFTVGSDMGFIQASGRSLVGELAAIAER*