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SCNpilot_expt_1000_bf_scaffold_5073_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(11699..12310)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Hoeflea sp. 108 RepID=UPI00036D74BA similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 193.0
  • Bit_score: 299
  • Evalue 3.50e-78
ABC transporter permease {ECO:0000313|EMBL:ESY35046.1}; TaxID=1287270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNJC386A00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 199.0
  • Bit_score: 291
  • Evalue 1.00e-75
amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family similarity KEGG
DB: KEGG
  • Identity: 66.8
  • Coverage: 193.0
  • Bit_score: 286
  • Evalue 7.40e-75

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Taxonomy

Mesorhizobium sp. LNJC386A00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGCTGCTGGCGATCCCCATCGGCCTTGTGCAGGTCGTCGGCCCGAAATGGCTTGCGCTGCCGGCGCGTGCGTTCTGCACCGTCATCCGGGGAACGCCGCTGCTGCTCCAGCTCTGGCTGCTCTATTACGGCCTCGGCTCGCTGTTCCCGCAGTTCCCCTGGATCCGCGACTCGGCACTATGGCCGATCCTCCGGCAGGCCTGGCCCTATGCGTTCCTCGGGCTGACGCTGTCCTACGCGGCCTATGAGGGCGAGGTCTTCCGCGGCGCGTTCAAGGGCGTGCCCAAGGGCCAGCTCGACGCGGCGCGGGCCTATGGAATGTCCGGCTTCCTGACCTTCCGCCGCATCTGGCTGCCGCAGGCCTTCCGGCGGGCGATGCCGACGCTCGCCGGCGAGACGATCCTCCAGCTCAAGGCGACCCCGCTGGTCGCGACGATCACGGTGATCGACGTCTATTCGGTCGCCGCGCAGGTGCGCCAGCAGACCTACCTGACCTACGAACCCCTCCTCCTCATCTCCGCGATCTACATCGTCCTTGCCGTGGTTATCACCAAGGTCTTCGCCCGACTGTCGGGCAAGAGCGGGGACAACACCGCCTTCCGCAAATCCTGA
PROTEIN sequence
Length: 204
MLLAIPIGLVQVVGPKWLALPARAFCTVIRGTPLLLQLWLLYYGLGSLFPQFPWIRDSALWPILRQAWPYAFLGLTLSYAAYEGEVFRGAFKGVPKGQLDAARAYGMSGFLTFRRIWLPQAFRRAMPTLAGETILQLKATPLVATITVIDVYSVAAQVRQQTYLTYEPLLLISAIYIVLAVVITKVFARLSGKSGDNTAFRKS*