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SCNpilot_expt_1000_bf_scaffold_5073_curated_13

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12512..12862)

Top 3 Functional Annotations

Value Algorithm Source
UPI0003CEC32C related cluster n=1 Tax=unknown RepID=UPI0003CEC32C similarity UNIREF
DB: UNIREF100
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 167
  • Evalue 7.00e-39
ABC transporter permease {ECO:0000313|EMBL:ESW86933.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.5
  • Coverage: 113.0
  • Bit_score: 167
  • Evalue 9.90e-39
polar amino acid ABC transporter permease; K02029 polar amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 113.0
  • Bit_score: 162
  • Evalue 9.30e-38

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Taxonomy

Mesorhizobium sp. LSJC280B00 → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
GTGATCCGCGGCGCGATCCTGTCCATCCCCTACGGCCAGATCGAGGCGGCGCATGCCTATGGCATGTCGTCCTGGCTGACGCTCCGCCGCATCACGCTGCCGGCCATGCTGCCCTTCGCCCTGCCGGGGCTTTCCAATCTCTGGCTGATCGCGATGAAGGACACGGCGCTGCTCGCCGTGCTCGGCTTCGGCGAGCTCACCCAGGTCACCCGCCAGGCGGCGGGCACCACGAAGGCCTATTTCACCTTCTTCATCGCCGCCGGCTGCATGTACCTGCTTGCGACGATGCTCTCCAATCTCCTCTCCCGCCGGCTCGAAGCCTGGGCGACGAAGGGTGTGGCGCATGTCTAG
PROTEIN sequence
Length: 117
VIRGAILSIPYGQIEAAHAYGMSSWLTLRRITLPAMLPFALPGLSNLWLIAMKDTALLAVLGFGELTQVTRQAAGTTKAYFTFFIAAGCMYLLATMLSNLLSRRLEAWATKGVAHV*