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SCNpilot_expt_1000_bf_scaffold_8110_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3..665

Top 3 Functional Annotations

Value Algorithm Source
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:KDP74869.1}; EC=1.3.1.1 {ECO:0000313|EMBL:KDP74869.1};; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 162.0
  • Bit_score: 336
  • Evalue 4.00e-89
dihydropyrimidine dehydrogenase subunit B n=1 Tax=Rhizobium giardinii RepID=UPI00035F54A6 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 162.0
  • Bit_score: 334
  • Evalue 6.30e-89
  • rbh
putative dihydropyrimidine dehydrogenase similarity KEGG
DB: KEGG
  • Identity: 93.2
  • Coverage: 162.0
  • Bit_score: 333
  • Evalue 4.40e-89
  • rbh

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Taxonomy

Ensifer adhaerens → Ensifer → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
GGCAAGGGCACCCATGGCGGCTATTGCGGCCCGGCGGTCAAGCCCATCGCGCTCAACATGGTGGCCGAGATTGCCCGCGACCCGGAAACCTACGGCCTGCCGATCTCGGGCATCGGCGGCGTGACGACCTGGCGGGACGCCGCCGAGTTCCTGGCGCTCGGCGCGGGCAACGTGCAGGTCTGCACGGCGGCCATGACCTACGGCTTCAAGATCGTCGAGGAGATGATCTCCGGCCTTTCCGACTGGATGGACGCCAAGGGCCACCGCAGCCTCGACGACATCTGCGGGCGCGCCGTGCCGAACGTCACGGACTGGCAGTACCTCAACCTCAACTACATCGCGAAAGCCCGCATCGACCAGGATGCCTGCATCAAGTGCGGCCGCTGCCACATCGCCTGCGAGGACACTTCGCACCAGGCGATCACCCAGTTCGTCGACGGCATCAGGCATTTCGAGGTGATGGAAGACGAATGCGTCGGCTGCAATCNNNNNNNNNNNNNNNNNNNNCATGGTGAGCCTCGAACCCGGCACGCTCGACCAGCGCACCGGCAAGCCCGTCGACCCGAACTACGCCAACTGGACGACCCATCCGAACAATCCGATGGCGCGGCAGGCGGCGGAATGAAACGAAACGGCCGGGGTAACGAGCCCCGGCCTTTCTGA
PROTEIN sequence
Length: 221
GKGTHGGYCGPAVKPIALNMVAEIARDPETYGLPISGIGGVTTWRDAAEFLALGAGNVQVCTAAMTYGFKIVEEMISGLSDWMDAKGHRSLDDICGRAVPNVTDWQYLNLNYIAKARIDQDACIKCGRCHIACEDTSHQAITQFVDGIRHFEVMEDECVGCNXXXXXXXHGEPRTRHARPAHRQARRPELRQLDDPSEQSDGAAGGGMKRNGRGNEPRPF*