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SCNpilot_expt_1000_bf_scaffold_8110_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(856..1494)

Top 3 Functional Annotations

Value Algorithm Source
Protein ExoD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C9W4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 212.0
  • Bit_score: 376
  • Evalue 1.40e-101
  • rbh
ABC-type transport system permease component {ECO:0000313|EMBL:EYR80908.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 212.0
  • Bit_score: 376
  • Evalue 1.90e-101
exoD; Protein ExoD similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 209.0
  • Bit_score: 256
  • Evalue 8.60e-66

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 639
ATGACGACGGCGATCGGCTTCAAGGACACGGACCGCAAGACGAGCGAACTGCTCGAGGATATTCTCCATTCGATCAAGGGGGAGCACGTCACGCTGCGCGACCTCCTGACGATGATGGGCGAAAGCGGCCTGCTGCTCCTGTGCGCCTTCCTGTCGCTGCCCTTCCTTTTCCCGGTCTCGATCCCCGGCGTCTCGACCGTCTTCGGGGCCGGCATCGTGCTGATCAGCGCGGCGATCACGCTGAACCGGCTGCCCTGGCTGCCGGAAAAGGTCGCCGACCGCCGGCTTGAAAACCGCAAGCTGCGGCCCGTGCTGGAGCGCGGGGTGACGTTCCTGCGCCGGATCGACCGGTTCTTCAAGCCGCGGCTCGCCGCGTTCACCACGGGCGCCGTCATGAACCGCATCAACGGGCTGGTGCTGATGGGGGCAGGGCTCCTGCTCATGGCGCCGCTCGGGCTCATCCCCTTCTCCAACACGCTGCCGGGCATCGCCATCCTGCTGCTTGCCGCCGGCATTTCGCAGCGCGACGGGCTGGTGGTGCTTGCCGGCTACGTGATGGTCGTGCTGACGATCGTGTATTTCTCGGCACTTGCGCTCCTCGCCTACAGCGCCGGGCAGAGCTTCAACATCTTCGGATGA
PROTEIN sequence
Length: 213
MTTAIGFKDTDRKTSELLEDILHSIKGEHVTLRDLLTMMGESGLLLLCAFLSLPFLFPVSIPGVSTVFGAGIVLISAAITLNRLPWLPEKVADRRLENRKLRPVLERGVTFLRRIDRFFKPRLAAFTTGAVMNRINGLVLMGAGLLLMAPLGLIPFSNTLPGIAILLLAAGISQRDGLVVLAGYVMVVLTIVYFSALALLAYSAGQSFNIFG*