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SCNpilot_expt_1000_bf_scaffold_10554_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1364..2608

Top 3 Functional Annotations

Value Algorithm Source
Biphenyl dioxygenase subunit alpha n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CAH9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.3
  • Coverage: 414.0
  • Bit_score: 824
  • Evalue 6.40e-236
  • rbh
Biphenyl dioxygenase subunit alpha {ECO:0000313|EMBL:EYR80174.1}; EC=1.14.12.18 {ECO:0000313|EMBL:EYR80174.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 414.0
  • Bit_score: 824
  • Evalue 9.00e-236
ring hydroxylating dioxygenase alpha-subunit; K00479 Rieske 2Fe-2S family protein similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 395.0
  • Bit_score: 734
  • Evalue 2.10e-209
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGGACATCAGCAGCGACGTGCTCCGCAAGCTCAAGAACCGGCGCGAGGGCTACAGCCTCGAGCAGGCCTTCTATATCGACCCCGACCATTACAAGCTCGACCTCGAGACGATCTGGTATCGCGACTGGCTGTTCATCGGCCATGACTGCGAGATCCCGAAGGCCGGCAACTTCTTCACCGTGCAGGTCGGCGATTATCCCGTCGTCGTCACCCGCGACCGTTCGGGCACCGTCCGCGCGCTGCACAATTCCTGCCGCCATCGCGGTTCGCGCGTGTGCACGCAGCACAAGGGCACCTCGGCCAAGCTCGTCTGTCCCTACCATCAGTGGACCTACGAGCTCGACGGCTCTCTGCTCTTTGCCCGCCACATGGCGGAGGATTTCGACAAGACGCAGCACAGCTTGAAGCAGATCCACTGCGAGACCGTCGGCGGCTACATCTTCATCTGCCTCGCCGACGAGGCGCCCGACTTTTCCGCCTTCCGTTCGACGGCCGAGCCTTATCTCGCCCGCCACCGCCTCGGCGAGACGAAGGTCGCCTTCGAGAGCACGATCATCGAGAAGGGCAACTGGAAGCTCGTCTGGGAGAACAACCGCGAGTGCTACCACTGCGCCGCAAACCACCCGGAGCTCTGCCGCACCTATCCGGAAGCGCCGAGCGCGACCGGCGTGCAAGGGGCGAAGGACGATCCGGTCATCGCCGCGCATTGGGCGAAGTGCGAGGCCGCGGGCCTGCCGAGCGAATTCCGCATCTCGCCGACCGGCCAGTTCCGCGCCGCCCGCATGCCGCTCATCCAGGATGCCGAGAGCTACACCATGTCCGGCGCGCGCGCGGTGCAGCGCCCGCTCTCCAACGACATGCTGGAAAGCCATGTCGGCACGCTGCTGCTCTTCCACTATCCGACGACGTGGAACCACGTCCTCGCCGACCACGCCATCACCTTCCGCGTGCTGCCGCTCGGCCCGGAACTGACGCAGGTCACGACGAAGTGGCTCGTCAACAAGGATGCGGTCGAGGGCGTCGACTACCGTCTCGACGAACTCACCCATGTCTGGACCGAGACCAACGACCAGGACCGCCGGATCGTCGAGGAAAATGCCTTCGGCATCCGCTCGCCCGCCTACCAGCCCGGCCCCTATTCGGCCGAGGACGAGGGCGGTGTCATGCAGTTCGTCGAATGGTATTCGAACCTCATGATCGAGCGGCTCGACGGCGCCAAGAAGCCGCTTACCAAGGTCGCGTGA
PROTEIN sequence
Length: 415
MDISSDVLRKLKNRREGYSLEQAFYIDPDHYKLDLETIWYRDWLFIGHDCEIPKAGNFFTVQVGDYPVVVTRDRSGTVRALHNSCRHRGSRVCTQHKGTSAKLVCPYHQWTYELDGSLLFARHMAEDFDKTQHSLKQIHCETVGGYIFICLADEAPDFSAFRSTAEPYLARHRLGETKVAFESTIIEKGNWKLVWENNRECYHCAANHPELCRTYPEAPSATGVQGAKDDPVIAAHWAKCEAAGLPSEFRISPTGQFRAARMPLIQDAESYTMSGARAVQRPLSNDMLESHVGTLLLFHYPTTWNHVLADHAITFRVLPLGPELTQVTTKWLVNKDAVEGVDYRLDELTHVWTETNDQDRRIVEENAFGIRSPAYQPGPYSAEDEGGVMQFVEWYSNLMIERLDGAKKPLTKVA*