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SCNpilot_expt_1000_bf_scaffold_10554_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2710..3708

Top 3 Functional Annotations

Value Algorithm Source
NADH oxidoreductase Hcr n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ESD5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 637
  • Evalue 8.90e-180
  • rbh
NADH oxidoreductase Hcr {ECO:0000313|EMBL:EYR80173.1}; EC=1.-.-.- {ECO:0000313|EMBL:EYR80173.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 332.0
  • Bit_score: 637
  • Evalue 1.20e-179
oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 334.0
  • Bit_score: 534
  • Evalue 3.30e-149
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 999
ATGACCTTCACCTTCAGCTCCGACCAGAAGAACTGGTTCCGGTATCTGCCGGGCCAGTTCGTCACGCTGGAGCTGCCGGTGTCGGAGGACGATCCGGTCATGCGCACATACACGCTGTCCTCCTCGCCATCGCGCCCGTTCTCGGTCGCGGTGACGGTGAAGGCGCAGAAGAACTCCATCGGCACGCGCTGGATGTTCGACAACCTGCGCCCCGGCATGAAGCTGAAGGCCTTCGGGCCGCTCGGCGACTTCTCCTTCGTGCGTTATCCCGCGGAGAAGTATCTCTTCATCTCCGCCGGCTTGGGCGTCACGCCGATGATGTCGATGACGCGCTGGATGGCCGATTGCGCGCCGCAGTCCGACGTCGCCTTCGTCACCTGCGCGCGCAAGCCGGAGGACCTGCTGTTCAAGGGCGAGCTCGAATGTCTTGCCGCCCAGATGCCGAACCTTGCGCTCGGCTTCGTCGTCGAGGGCCACAATCCGCGCGACGGCTGGCATGGCCTTCGCGGCCGCATCGACGCGGCGCGCCTTTCGCTGCTCGCCCCGGATTTCCGGGACCGCACCGTCTTCTGTTGCGGTCCCGAGCCCTTCATGCGCGGTGTGCGCGACATGCTGAAGGTCTGCGGCTTCAACATGGACCGCTATCACGAGGAGAGCTTCCAGCCGTCTAGCGCCCCCGCGCCGGAGGAAATCGCCATACGTGCCGGCGCCGGCGAGCAGGAGGTGGATGCCGATGCCGTCGCGACCGTCAGCTTCACCATGGCCGGCAAGGAGGGCAAGTGCCCGCCCGGCCAGACGATCCTGCAGACGGCCCGCGCCGCCGGTGTGCGCATCGGCGCGGCCTGCGAGGGCGGGCTTTGCGGCACCTGCCGGGTGATGAAGGTCTCTGGCGAGGTGGAGATGCGCCACAATGGCGGCATTCTCGATGACGAGATCGCGGAAGGCTATATCCTCGCCTGCTGCTCGCGGCCCATCGGGGATGTTTCCATCGAGGCGTGA
PROTEIN sequence
Length: 333
MTFTFSSDQKNWFRYLPGQFVTLELPVSEDDPVMRTYTLSSSPSRPFSVAVTVKAQKNSIGTRWMFDNLRPGMKLKAFGPLGDFSFVRYPAEKYLFISAGLGVTPMMSMTRWMADCAPQSDVAFVTCARKPEDLLFKGELECLAAQMPNLALGFVVEGHNPRDGWHGLRGRIDAARLSLLAPDFRDRTVFCCGPEPFMRGVRDMLKVCGFNMDRYHEESFQPSSAPAPEEIAIRAGAGEQEVDADAVATVSFTMAGKEGKCPPGQTILQTARAAGVRIGAACEGGLCGTCRVMKVSGEVEMRHNGGILDDEIAEGYILACCSRPIGDVSIEA*