ggKbase home page

SCNpilot_expt_1000_bf_scaffold_5613_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(10695..11387)

Top 3 Functional Annotations

Value Algorithm Source
winged helix family two component transcriptional regulator; K13584 two-component system, cell cycle response regulator CtrA similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 233.0
  • Bit_score: 425
  • Evalue 8.90e-117
  • rbh
Two component transcriptional regulator, winged helix family n=9 Tax=Rhizobium meliloti RepID=F6BT99_SINMB similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 233.0
  • Bit_score: 425
  • Evalue 2.80e-116
  • rbh
CtrA response regulator {ECO:0000313|EMBL:AEH80126.1}; TaxID=707241 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium meliloti (strain SM11).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 233.0
  • Bit_score: 425
  • Evalue 4.00e-116

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sinorhizobium meliloti → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGCGGGTTCTACTCATTGAGGACGATAGCGCCACGGCGCAGAGCATCGAGCTGATGCTGAAGTCCGAAAGTTTTAATGTGTATACCACCGACCTCGGCGAGGAAGGTGTCGACCTGGGCAAGTTGTACGATTACGACATCATCTTGCTCGACCTCAACCTCCCCGACATGTCGGGTTACGAGGTTCTGCGCACGCTGCGCCTTTCCAAGGTCAAGACGCCGATCCTCATCCTCTCCGGCATGGCCGGCATCGAGGACAAGGTGCGCGGCCTCGGCTTCGGCGCCGACGACTACATGACGAAGCCGTTCCACAAGGACGAGCTCGTCGCCCGCATCCACGCCATCGTGCGCCGCTCCAAGGGCCATGCCCAGTCGGTCATCTCGACGGGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGCCAGCGCGTGCACCTGACGGGCAAGGAATACCAGATGCTCGAGCTGCTCTCGCTGCGCAAGGGCACGACGCTCACCAAGGAAATGTTCCTCAACCACCTCTATGGCGGCATGGACGAGCCGGAACTGAAGATCATCGACGTCTTCATCTGCAAGCTGCGCAAGAAGCTGGCGAACGCCGCCGGCGGCGCCAACTATATCGAGACGGTCTGGGGTCGCGGCTACGTGCTGCGCGAGCCCGAGGGCGGCGACTATCTCGAAAGCGCCTGA
PROTEIN sequence
Length: 231
MRVLLIEDDSATAQSIELMLKSESFNVYTTDLGEEGVDLGKLYDYDIILLDLNLPDMSGYEVLRTLRLSKVKTPILILSGMAGIEDKVRGLGFGADDYMTKPFHKDELVARIHAIVRRSKGHAQSVISTGXXXXXXXXXXXGQRVHLTGKEYQMLELLSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANAAGGANYIETVWGRGYVLREPEGGDYLESA*