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SCNpilot_expt_1000_bf_scaffold_5613_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 11917..12267

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:EYR80843.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.6
  • Coverage: 116.0
  • Bit_score: 213
  • Evalue 2.00e-52
flagellar export protein FliJ n=1 Tax=Rhizobium giardinii RepID=UPI00037F4DB0 similarity UNIREF
DB: UNIREF100
  • Identity: 84.5
  • Coverage: 116.0
  • Bit_score: 194
  • Evalue 5.40e-47
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 79.3
  • Coverage: 116.0
  • Bit_score: 186
  • Evalue 4.60e-45

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAAGTCGCGTGAGAGCCTAGTTCGCCTGAAGGAATTTCAGGTGAAAGACAAGAGACGGCAGCTGGCCCAGCTTCAGCTCATGATGTCCGAATTCGAACGGATGTCGAAGGAGCTGGAAAGCCAGATCGCCATCGAAGAGAAGAAGTCCGGGATCACCGATCCGGGCCACTTCGCCTATCCGACCTTCGCCAAGGCGGCGCGGCAGCGTTCCGACAACCTCCAGGTCTCCATAAGGGAACTGAAGGTGCAGCAGGATGCGGCCGAACTGGCACTGGAAGAGGCGGAGGCGGAATTCGCCAAGGCTTCGGCGCTGGAAGAGCGCGACAACGCGGTCCGGATGCGCGCCTGA
PROTEIN sequence
Length: 117
MKSRESLVRLKEFQVKDKRRQLAQLQLMMSEFERMSKELESQIAIEEKKSGITDPGHFAYPTFAKAARQRSDNLQVSIRELKVQQDAAELALEEAEAEFAKASALEERDNAVRMRA*