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SCNpilot_expt_1000_bf_scaffold_3587_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2997..3719

Top 3 Functional Annotations

Value Algorithm Source
High-affinity branched-chain amino acid transport ATP-binding protein BraG n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CM43_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 87.5
  • Coverage: 240.0
  • Bit_score: 404
  • Evalue 7.00e-110
  • rbh
High-affinity branched-chain amino acid transport ATP-binding protein BraG {ECO:0000313|EMBL:EYR78652.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.5
  • Coverage: 240.0
  • Bit_score: 404
  • Evalue 9.90e-110
putative branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 240.0
  • Bit_score: 345
  • Evalue 1.20e-92
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGACGAACATATTGAGCGTTGAAAATGTCGAACTCTACTACGACCACATCTATGCGCTGAAAGGCGTCTCGATCGACGTGGGCGAAGGCGAGACCGTCGCGCTGATCGGCGCGAACGGCGCGGGCAAGTCCTCGATCCTGCGGGCGATCACGGGGCTCCGGCCGATCAAGTCCGGCCGGATCACCTACCAGGGCGAAAAGCTCGACGGCACGCCCGCCGCCGAGATCGTCCGCCGGGGCATCTCCATGGTGCCGGAGGGCCGCCGCGCCTTCCCGCTGATGTCCGTCAAGGACAACCTGCTGATGGGCGCCTTCACCCGCACCGACAAGGCGGAGATCGAGCAGACGCTGGAGAACGTGCTGACGCGCTTCCCGCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCAGCAGATGATGGTGATCGGCCGTGCCCTCATGGCCCGCCCGAAACTCCTGCTTCTCGACGAGCCGTCGCTCGGCATCGCGCCGAAGATCGTGCAGGACATCGCCCGCGCCATCGTCGCCATCAGCCGCGACGAGAAGGTCTCCATCCTCCTCGTCGAGCAGAACAGCCGCATGGCGCTCTCCATCTCCAACCGCGCCTACGCGCTTTCCACCGGGTCGATCGCGCTGTCAGGCAATTCGAAGGAACTGATGAACGACGACCGCATCAAGGCTGCCTACCTCGGAGGCGAACTCTGA
PROTEIN sequence
Length: 241
MTNILSVENVELYYDHIYALKGVSIDVGEGETVALIGANGAGKSSILRAITGLRPIKSGRITYQGEKLDGTPAAEIVRRGISMVPEGRRAFPLMSVKDNLLMGAFTRTDKAEIEQTLENVLTRFPRXXXXXXXXXXXXXXXEQQMMVIGRALMARPKLLLLDEPSLGIAPKIVQDIARAIVAISRDEKVSILLVEQNSRMALSISNRAYALSTGSIALSGNSKELMNDDRIKAAYLGGEL*