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SCNpilot_expt_1000_bf_scaffold_3587_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3721..4440

Top 3 Functional Annotations

Value Algorithm Source
Hydantoin racemase HyuE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C6B9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 236.0
  • Bit_score: 410
  • Evalue 9.80e-112
  • rbh
Hydantoin racemase HyuE {ECO:0000313|EMBL:EYR78653.1}; EC=5.1.99.5 {ECO:0000313|EMBL:EYR78653.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 236.0
  • Bit_score: 410
  • Evalue 1.40e-111
putative hydantoin racemase similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 227.0
  • Bit_score: 326
  • Evalue 5.80e-87
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGAAAATCCTCGTCATCAACCCCAACACGACTGCATCGATGACGGACCACATCGGGAAGGCGGCACGCGCCGCCGCCTCTCCCGGCACGCAGATCACCGCCGTCAACCCGGCGCATGGCCCCGTCTCCATCGAAGGCTATTTCGACGAGGCGATGAGCCTTGCCGGCCTGCTCGACACGATCCGCCGCAACCCGGATTGCGACGCCGTCGTCATCGCCTGCTTCGACGACACCGGCCTCGACGCGGCGCGCTGCCTCACCGACCGGCCGGTGATCGGCATCGGCGAGGCGGCCTATCATTTCGCCTCGATGATCTCGAACAAGTTCTCGGTCGTCACCACGCTCGCCCGTTCCGTACCCGCGCTGGAGCACAACCTTGCCCGCTACGGCCTCGACGCGCGCTGTGCACGCGTGCGCGCCTCCGATGTCGCCGTGCTGGAACTGGAGAAGCCCGGTTCCAATGCCCGGCAGAAGATCAGCGCCGAGATCGGCCTTGCCGTCAGCGAGGACCGCGCGGAGGCCATCGTGCTCGGCTGTGCCGGCATGGCGGGCCTTGCCGCCGATCTCGCGCGGGAACACGGCCTGCCGGTGCTCGACGGCGTGTCCTGCGCGGGGAAGCTCGCCGAGGCCATGGCCGGCCTCAACATGCGCACCTCGCGCCTCGGCGGCTACGCGCCGCCGCCGCCGGCAAAGCTCGAAAGCATCTTCCGCAACGCTTAG
PROTEIN sequence
Length: 240
MKILVINPNTTASMTDHIGKAARAAASPGTQITAVNPAHGPVSIEGYFDEAMSLAGLLDTIRRNPDCDAVVIACFDDTGLDAARCLTDRPVIGIGEAAYHFASMISNKFSVVTTLARSVPALEHNLARYGLDARCARVRASDVAVLELEKPGSNARQKISAEIGLAVSEDRAEAIVLGCAGMAGLAADLAREHGLPVLDGVSCAGKLAEAMAGLNMRTSRLGGYAPPPPAKLESIFRNA*