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SCNpilot_expt_1000_bf_scaffold_3587_curated_17

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(13941..15014)

Top 3 Functional Annotations

Value Algorithm Source
(R,R)-butanediol dehydrogenase BdhA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CFQ3_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.8
  • Coverage: 357.0
  • Bit_score: 699
  • Evalue 2.10e-198
  • rbh
(R,R)-butanediol dehydrogenase BdhA {ECO:0000313|EMBL:EYR83097.1}; EC=1.1.1.4 {ECO:0000313|EMBL:EYR83097.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.8
  • Coverage: 357.0
  • Bit_score: 699
  • Evalue 2.90e-198
zinc-binding dehydrogenase (EC:1.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 357.0
  • Bit_score: 692
  • Evalue 7.90e-197
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1074
ATGAAAGCTCTGCGCTTCCACGCCGCCAAGGACCTGCGTATCGAGGAGGTCGATGCGCCGCCGTCGCCCGGCCCGGGCGAGGTGCTGGTCGAGAACCGCTTCTGCGGTATCTGCGGCACGGACCTGCATGAATATGCCTATGGCCCGATCTTCGTGCCGAAGGAACCGCATCCGTTTACCGGCGCGCACGGCCCGCAGATCCTCGGCCACGAATTCGGCGGGGTCGTCAAGGCCGTCGGCGAAGGGGTCGGCCATGTAAAGCCGGGGGATCGTGTCTCGATCCAGCCGCTGATCATGCCCCGCCATGGCGACTACTACGCCGACCGCGGCCTGTTCCAACTCAGCGGCAACCTCGCGCTCGCCGGCCTGTCCTGGCATTCCGGCGGCATGGCGCAGGCAGCGCTTGTCAACGACTATAACATCCAGCCCATTCCCGATGCGCTGAGCGACGAGGAAGCCGCCCTGATCGAGCCGACGGCGGTCGCCGTCTACGCCTGCGATCGTGGTGGCGTGACGGCCGGCAACAGCGTGCTCGTCACCGGCGCGGGACCGATCGGCATTCTCGTCGCCATGGCGGCGCGGGCGGCCGGGGCCTCGCAGATCTTCCTGTCGGATCTGAACGATACCCGGCTGGCTCTGGCGCGGGAGGCACTGGGCGAGGTGCGCACCATAAACCCAAGGACGGAAAAGGTCGGCGACGTCATCCGCGCCGAGACGGAGGGCGGCGTCGGCTGCGATGTCGCCATCGAATGCGTCGGCAACGAGCATGCGTTGAAGAATTGCGCAGACGCCGTGCGCAAGCAGGGCGTTGTGGTGCAGACCGGGCTTCATCCCGGCGAGACCCCTCTGAACTGGTTCGACGTCACCTTCAAGGACATCGATATCCGCGGCTCCTGGGCCTACCCGACCCACTACTGGCCGCGCGTCGCCCGGCTGATCGCCAGCGGCCAGATTCCGGCGAGCCGTATCGTCACGAAACGTGTCTCGCTCGGCGAGGCCGTCACCGAAGGGTTCGACCAGTTGCTCGACCCTGCCGGCAAGCACCTGAAGATCCTGATCGACCTCACGCGATAG
PROTEIN sequence
Length: 358
MKALRFHAAKDLRIEEVDAPPSPGPGEVLVENRFCGICGTDLHEYAYGPIFVPKEPHPFTGAHGPQILGHEFGGVVKAVGEGVGHVKPGDRVSIQPLIMPRHGDYYADRGLFQLSGNLALAGLSWHSGGMAQAALVNDYNIQPIPDALSDEEAALIEPTAVAVYACDRGGVTAGNSVLVTGAGPIGILVAMAARAAGASQIFLSDLNDTRLALAREALGEVRTINPRTEKVGDVIRAETEGGVGCDVAIECVGNEHALKNCADAVRKQGVVVQTGLHPGETPLNWFDVTFKDIDIRGSWAYPTHYWPRVARLIASGQIPASRIVTKRVSLGEAVTEGFDQLLDPAGKHLKILIDLTR*