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SCNpilot_expt_1000_bf_scaffold_3587_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(15176..17047)

Top 3 Functional Annotations

Value Algorithm Source
Acetoin catabolism regulatory protein AcoR {ECO:0000313|EMBL:EYR83098.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.9
  • Coverage: 623.0
  • Bit_score: 1101
  • Evalue 0.0
Acetoin catabolism regulatory protein AcoR n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CVR4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 623.0
  • Bit_score: 1101
  • Evalue 0.0
  • rbh
acetoin catabolism regulatory protein similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 626.0
  • Bit_score: 1085
  • Evalue 0.0
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1872
ATGGGGTCGACGCTGTCGCACATACGGGAGATCGAACGCGTCGGCATGGGCGCGGTCAGCCCGCGCGATGCGCCCGTCATCCAGTCCTGGCTGCGCTGCCTCAACGACTACAAGCTCGATCCGGCCGTCGCGCAGGAAGCCTATATCGTTCCCGAACTGAAGCTGCGCGAGCATCGCGAGCAGGCCGAGGAGCTGATCCGCATCGGCCGCTCGGGTCTGGAAGCGCTGTTCAACCAGGTGGCCGGGCAGAACTACGTGCTGCTGCTTTCCGATGCGCGCGGCGTCACCGTCGATTTCATGGGCGATCCGACCTTCGACAACCAGTTGCGCAAGGCGGGGCTCTATCTCGGCTCGGAATGGTCGGAGAACCGGGCGGGCACCTGCGCGGTCGGGGCCTGCATGGTCTCCGGCGAGCCTGTCATCATCCATCAGGACGACCATTTCGATACCAGCCATATCGGCCTTACCTGCACCGCCGCGCCGGTCTTCGACACGCTGGGCAGCCTGACGGCCGTGCTCGACATCTCGCAGCTCCGCTCGCCGACGGTGAAGACGAGCCAGCAGCTCGCGCTGCATCTCGTCGCCTCCACCGCGCGGCGCATCGAGCTTGCCAATCTCATGACCCGCACCCGCAACGACTGGGTGCTGCGCCTTGCCCGCTCGCCGGAATTCCTCGATGTCGATCCCGATGCCGCCATCGCGCTCGACGGCAGCGGCCGCATCACCGGCCTTACTCATGGCGGCTTCGGCGCGCTCGCCCGTTCGATGAACCTTGCCGGCCTTTCCACCCGCGATTTCCTCGGCCAGCCGATCTCGCAGGTCTTCGACATCGACGTCGACGACCTGCCGCGCTTCATGCGCGGCCGGTCGAACGGCGAGCGGCTGCTTCAGGCGCGCAACGGGCTGGTGCTGTTCGCGAGCTCCGTCGCGCCGGCGGTCAATCTTCGTTCGGTCGTGCCGGCGCAGCCGCGCCTGCCGCGGGCGCTCCGGGACCTCAGCAACGGCGATGCCGCGATGGAGCGGGTGCAGGCGCGCGCGGCAAAGCTCGCCGCGCGTGATATCCCGATCCTCATCCAGGGGGAGACGGGCAGCGGCAAGGAGTTCCTGGCGCGGGCGATCCATGACGGTTGCGGCGGCAGCGGGGCCTTCGTCGCGGTCAATTGCGCGGCGATCCCCGAGCACCTCATCGAATCCGAGCTCTTCGGCTATGCGCCGGGCGCCTTTACCGGCGCCAGCCAGAAGGGCAAGCGCGGCCTGATCGAGGAGGCGAGCGGCGGCACGCTCTTCCTCGACGAGGTCGGCGACATGCCGTTTGCCCTGCAAAGCCGGCTCCTGCGCGTGCTCTCGGAAAACGAGGTGCAGCCGGTCGGGGCGCTCAAGGCGCGCGCGGTGCGCCTCAGGGTTCTCTCCGCCTCGCATCGCGACCTTGCCGAACTGGTGCGGGAGGGCCGCTTCCGGCAGGACCTCTATTATCGCCTCAACGCGGCGACGCTCAGCCTGCCGGCGCTGCGGGAGCGGCAGGATCTCGGCTGGCTCGTCGACCAGCTCCTCGCGCGCATCGAGAAGGAGAACGGCGCATCCTACCGGCTCGACAGGGCGGCGCGGGCGGTGCTGCTCGCCCATGACTGGCCGGGCAACCTGCGGGAACTTTCCAATGCGCTGCGCGTGGCGGCGGCGCTGTCGGAGGGCGGCGTGATCGGCACCGACAGCCTGCCGGATCACCTTTTCGCCGAACCGGCCGCCGCCCGGCCCGGCGGCGAGGACGCCCTGCGCCAGGCCCTCACGGACTGCGGCAACAATATTTCCGCGCTCGCCCGCAAGCTCGGCGTCAACCGCTCCACCATCCACCGCCGCCTCAAGCGCCTCAACTGA
PROTEIN sequence
Length: 624
MGSTLSHIREIERVGMGAVSPRDAPVIQSWLRCLNDYKLDPAVAQEAYIVPELKLREHREQAEELIRIGRSGLEALFNQVAGQNYVLLLSDARGVTVDFMGDPTFDNQLRKAGLYLGSEWSENRAGTCAVGACMVSGEPVIIHQDDHFDTSHIGLTCTAAPVFDTLGSLTAVLDISQLRSPTVKTSQQLALHLVASTARRIELANLMTRTRNDWVLRLARSPEFLDVDPDAAIALDGSGRITGLTHGGFGALARSMNLAGLSTRDFLGQPISQVFDIDVDDLPRFMRGRSNGERLLQARNGLVLFASSVAPAVNLRSVVPAQPRLPRALRDLSNGDAAMERVQARAAKLAARDIPILIQGETGSGKEFLARAIHDGCGGSGAFVAVNCAAIPEHLIESELFGYAPGAFTGASQKGKRGLIEEASGGTLFLDEVGDMPFALQSRLLRVLSENEVQPVGALKARAVRLRVLSASHRDLAELVREGRFRQDLYYRLNAATLSLPALRERQDLGWLVDQLLARIEKENGASYRLDRAARAVLLAHDWPGNLRELSNALRVAAALSEGGVIGTDSLPDHLFAEPAAARPGGEDALRQALTDCGNNISALARKLGVNRSTIHRRLKRLN*