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SCNpilot_expt_1000_bf_scaffold_2346_curated_16

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 12780..14066

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXU5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 425.0
  • Bit_score: 803
  • Evalue 9.30e-230
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR80108.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 425.0
  • Bit_score: 803
  • Evalue 1.30e-229
transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 81.9
  • Coverage: 425.0
  • Bit_score: 701
  • Evalue 2.00e-199
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1287
GTGCAGGGCATGGCAAAGGGTAGTTTCGCCTTTCCGCAGTCGGTTGCGCGTGCGCAGGCGCTCGGGGAAATTCACGCACGACCATATGCGCTGGTGCCGTCGCCGCGCGTCATCTTCCAGCTCGCCTTCCTGACCGAGGGCGGCTCGGCGGTCGACCATGCGGTCATGGCGGAGCTGTCGCGCTCGCGCGGCATCTCGCCGCCCGGCCGCGATTCCAGCCACCACGCGCTGAGCTGGGGGCAGGGCACGCTGCGCTGGGAGCGGCACACCGAATTCTCGACCTATTTCTGGGATGCGCCCGTGCCGGAGAAGTTCGGTGGCGAGGTCGCCGTCCACCCGTTCGGCGACAGCTTCTCGCCGCCCGGCACGCTGATCTCCGGCATCCGCCTCGAAATCCGGCCGGATTCGCCCGAAACCCGCGAGGCGATCTCCGCCTTCGATCCGACGAGCCTCTGTTACAGCGAGATCAAGAACGGCCAGGGCGTCGTCCTCACCGACTTCCGCCAGGACGGCGACGGGCTGACGCAGATCCTCGTCATCGACCGTGGCATGACGGAGGCCGGGCGCGGCGCGCTCGTCCAGCGCCTGCTCGACATCGAGACCTACCGCACGCTGGCCATGATGGGCCTTCCCCTCGCCCAGTCGCTCTCGCCCGACATCCGCCGCATCGAGGACGGGCTGACCGGCATCACCAATGCCATGAAGCAGCACGCCCGCGACAAGGCCGACGAGCTGCTCACCGAGATCACCCGCCTTGCCGCCGAACTGGAGGCCAACGCCGCGCTCAGCCTCTACCGCTTCGGCGCGAGCCGCGCCTATTACGGCATCGTGCAGGAGCGCATCCGCACCCTGGCCGAAACGGCGGTGCCGGGCTATGAGACGCTCGGCTTCTTCCTGGAGCGCCGGCTGGCGCCGGCCATGCGCACCTGCCAGTCCGTCGAGGAGCGGCAGGCGAACCTCTCGCGCAAGCTCGCCCGGGCCACGGCGCTGCTTCGAAGCTGGATCGACGTGGAACTGGAGCAGCTCAACTCGACGCTGCTCAATTCCATGGACCGCCGCGCGAAATTGCAGCTCCGCCTGCAGCAGACCGTCGAGGGCCTGTCGGTCGCGGCGATCTCCTATTATGTCGTGGGGCTCTTCGGCTACATGGCCAAGGCGGCGCACGGGGTCGGGCTGCCGGTCAAGCCGGAGACGCTGACGGGCATCGCGGTGCCATTCGTCATCCTCGGCATGTGGCTGCTCGTCCGCGCGATCCGCCGCCGCCATGCGGAGGAGGCCCGCCATTGA
PROTEIN sequence
Length: 429
VQGMAKGSFAFPQSVARAQALGEIHARPYALVPSPRVIFQLAFLTEGGSAVDHAVMAELSRSRGISPPGRDSSHHALSWGQGTLRWERHTEFSTYFWDAPVPEKFGGEVAVHPFGDSFSPPGTLISGIRLEIRPDSPETREAISAFDPTSLCYSEIKNGQGVVLTDFRQDGDGLTQILVIDRGMTEAGRGALVQRLLDIETYRTLAMMGLPLAQSLSPDIRRIEDGLTGITNAMKQHARDKADELLTEITRLAAELEANAALSLYRFGASRAYYGIVQERIRTLAETAVPGYETLGFFLERRLAPAMRTCQSVEERQANLSRKLARATALLRSWIDVELEQLNSTLLNSMDRRAKLQLRLQQTVEGLSVAAISYYVVGLFGYMAKAAHGVGLPVKPETLTGIAVPFVILGMWLLVRAIRRRHAEEARH*