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SCNpilot_expt_1000_bf_scaffold_2346_curated_19

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 16551..17750

Top 3 Functional Annotations

Value Algorithm Source
Glycolate oxidase subunit GlcE n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CXY9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 398.0
  • Bit_score: 665
  • Evalue 3.70e-188
  • rbh
Glycolate oxidase subunit GlcE {ECO:0000313|EMBL:EYR80114.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 398.0
  • Bit_score: 665
  • Evalue 5.10e-188
glcE1; glycolate oxidase subunit GlcE similarity KEGG
DB: KEGG
  • Identity: 68.7
  • Coverage: 393.0
  • Bit_score: 514
  • Evalue 2.50e-143
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1200
ATGACGCCGATCCACGAACCGCTTTCCGAAGAGGCCGCCGCGCGCCTCGTCCAGGTCGCCGCGCTCTCCAAGACGCCTTTCGTCATCCGGGGTGGCGGCACGCGCAGCCTCCATCCGGCGCCGGAGGGGGGCGAAGTCCTTTCGACGCGCGGCCTCAATGGCATCGTCGCCTACAATCCCGCCGAAATGACCATGACGGCCCGCGCCGGCACGCCGCTGGAGCTGGTGGAGGCCGCGCTTGCCGAAAAGCGCCAGATGCTCGCCTTCGAGCCGAACGACCTGCGCGGCGTGCTCGGCACCTCGGGCCTGCCGACCATCGGCGGCGTCTTCGCCACCAATGCCTCCGGCCCGCGGCGCTTTACGGCCGGCGCGGCGCGCGACAGCCTGCTCGGCGTGCGTTTCGTCAATGGCAGGGGCGAGGTGGTGAAGGCCGGCGGCCGGGTGATGAAGAACGTCACCGGCCTCGACCTCGTCAAGCTGCTCGCCGGCTCGCACGGTTCGCTGGCGCTCCTGACGGAGGTCACCTTCCGGCTGCTGCCGGTGCCCGAAACCGCCGTCACCCTCGTCGTCTCCGGTCTCAACGACGCGGAAGCCGCCGCCGCCATGGCGACGGCCATGTCGATGTCGGTCGAGGTCTCGGGCGCCGCCCACCTTCCCGAAAGCGTGCGAGGCCGCTTTGCCGGCGGCGCCCTGCCGGATGGCGCCGCCACCGTGCTCCGTCTCGAAGGGCTGGCCGCCTCGGTCGCTGTCCGCGCGGAAAGGCTTGCTGCCGCCATGGCCGGTTTCGGCGCCGTCTCGCGGCTGGAGGCGGAAGCCACGCGCCGCCTCTGGCGCGAGATCCGCGACGGCGCGCCCTATGCCGACGGCACCCCGCGCCCGCTCTGGCGCGTCTCCGTCGCTCCCGTCGCCGGCCAGCAGCTCGTCGCCGCGCTCCGCCTCGAAACCGGTGTCGACGCCTTCTACGACTGGCAGGGCGGCCTCGTCTGGCTGCGCATGGAGGCCGATCCCGAGGAAGCGCTGCTGCGCCGCTACATCAAGGCTGTTGGCGGCGGGCACGCCACGCTGGTGCGCGCGCGGGCGGAGGCGCTGGCGGCGAGCGAGGTCTTCCAGCCGCAGGCCGAGGCTGTCGCAATGCTTCAGGCGCGGGTGAAGGCGAGCTTCGATCCGGACGGGCTGTTCCGGTCGCGGATGGTGGGATGA
PROTEIN sequence
Length: 400
MTPIHEPLSEEAAARLVQVAALSKTPFVIRGGGTRSLHPAPEGGEVLSTRGLNGIVAYNPAEMTMTARAGTPLELVEAALAEKRQMLAFEPNDLRGVLGTSGLPTIGGVFATNASGPRRFTAGAARDSLLGVRFVNGRGEVVKAGGRVMKNVTGLDLVKLLAGSHGSLALLTEVTFRLLPVPETAVTLVVSGLNDAEAAAAMATAMSMSVEVSGAAHLPESVRGRFAGGALPDGAATVLRLEGLAASVAVRAERLAAAMAGFGAVSRLEAEATRRLWREIRDGAPYADGTPRPLWRVSVAPVAGQQLVAALRLETGVDAFYDWQGGLVWLRMEADPEEALLRRYIKAVGGGHATLVRARAEALAASEVFQPQAEAVAMLQARVKASFDPDGLFRSRMVG*