ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2346_curated_20

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 17929..19251

Top 3 Functional Annotations

Value Algorithm Source
Glycolate oxidase iron-sulfur subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C819_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 431.0
  • Bit_score: 819
  • Evalue 1.70e-234
  • rbh
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.1
  • Coverage: 431.0
  • Bit_score: 819
  • Evalue 2.40e-234
glcF; glycolate oxidase, iron-sulfur subunit (EC:1.1.3.15); K11473 glycolate oxidase iron-sulfur subunit similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 433.0
  • Bit_score: 720
  • Evalue 4.40e-205
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
ATGCAGACCAACTTCACCGCCGGGCAGCTCGCCGATCCCCATGTCGCGACATCGGAAAAGATCCTGCGCAAATGCGTGCATTGCGGCTTCTGCACCGCCACTTGTCCCACCTATGTGACGCTCGGCAACGAGCTCGACAGCCCGCGCGGGCGCATCTACCTCATCAAGGACATGCTGGAGAACGGCCGGCCGGCCGATGCGGAAGTGGTCACCCATATCGACCGCTGCCTCTCCTGCCTTTCCTGCGTGACCACCTGTCCCTCCGGCGTCGACTACATGCATCTCGTCGACCATGCGCGCATGCACATCGAGGAGACCTATAGGCGGCCCTTCTGGAACCGTCTGGCGCGCAGCGTGCTGGCGGCGGTGCTGCCCCACCCCGGCCGCTTCCGCCTGGCGCTGAGGGCGGCACATCTCGGCCGCCCCTTCGCCGGCCTCCTCAAGCGCTTCAAGCCGCTCGAACCTTTCGGCGCCATGCTGGACCTTGCGCCCCGCAGCCTGCCCAAGGCCGCCGACAGCGCAGGGCCCGGCACCCATCCCGCCGCCGGCCCGCGCCGCGGCCGGGTGGCGATCCTCTCGGGCTGCGCCCAGCCGGTGCTGAAGCCGGAGATCAACGGGGCGACGATCCGCCTGCTGACACGCCTCGGCGTCGAGGTCGTGGCGCCAGCGGGCGAGGTCTGCTGCGGCTCGCTCGTCCATCACATGGGCCGGGAGGCAGAGGCGCTGGAGGCGGCGCGGCGCAATGTCGACGTCTGGCTCGGCGAGGCCGAGAAAAGCGGCCTCGACGCCATCATCGTCACGGCTTCCGGCTGCGGCACGACGATCAAGGACTACGGTTTCATGCTGCGCCTCGATCCCGCCTATGCGGAAAAGGCCGCCCGCGTCTCGGCGCTCGCCAGGGACATCACGGAATATCTCGCCACCCTCGACCTGCCGCAAAAGGAGGCGAAGGGGCTGACGGTCGCCTATCACTCGGCCTGCTCGATGCAGCATGGCCAGAAGATCACCATGCTGCCGAAGACGCTCCTGAAGAAGGCGGGCTTTGCCGTGCGCGATCCGGCGGAGGGGCACCTGTGCTGCGGTTCGGCCGGCACCTACAACATCCTGCAGCCCGAGATTTCCGGCAAGCTGAAGGCACGCAAGGTGAAGAACATCGAGGCGACGAAGCCCGATCTCATCGCGACCGGCAATATCGGCTGCATCACCCAGATCGCCACGGGAACGGCGATCCCGATCCTGCACACGGTCGAACTGCTCGACTGGGCCTATGGCGGGGAAAGGCCGGCAGCGCTCCCGGCGCAGGATACGAAAATGCCGGCCTGA
PROTEIN sequence
Length: 441
MQTNFTAGQLADPHVATSEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADAEVVTHIDRCLSCLSCVTTCPSGVDYMHLVDHARMHIEETYRRPFWNRLARSVLAAVLPHPGRFRLALRAAHLGRPFAGLLKRFKPLEPFGAMLDLAPRSLPKAADSAGPGTHPAAGPRRGRVAILSGCAQPVLKPEINGATIRLLTRLGVEVVAPAGEVCCGSLVHHMGREAEALEAARRNVDVWLGEAEKSGLDAIIVTASGCGTTIKDYGFMLRLDPAYAEKAARVSALARDITEYLATLDLPQKEAKGLTVAYHSACSMQHGQKITMLPKTLLKKAGFAVRDPAEGHLCCGSAGTYNILQPEISGKLKARKVKNIEATKPDLIATGNIGCITQIATGTAIPILHTVELLDWAYGGERPAALPAQDTKMPA*