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SCNpilot_expt_1000_bf_scaffold_3265_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2494..3237)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane protein {ECO:0000313|EMBL:EYR78961.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 247.0
  • Bit_score: 451
  • Evalue 5.50e-124
membrane protein n=1 Tax=Rhizobium giardinii RepID=UPI0003687E4A similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 247.0
  • Bit_score: 417
  • Evalue 1.10e-113
  • rbh
hypothetical protein; K06890 similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 246.0
  • Bit_score: 390
  • Evalue 3.40e-106
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 744
ATGGCTGATCTCCGCAACTACCAGACCCGGACGGCGAATACCGGCACCCAGGCCGGCGCCGTCATAGACGAGGGCCTGCGCGCCTACATGCTCCGGGTCTACAACCTGATGGCGCTGGGTCTTGCGATCACCGGCGTCGTGGCGTTCTTCGCCTCCCAGGCCGCGTTTTCCGGCGGCCAGCTCACGGCCTTCGGGCAGGCGATCTATCTCAGCCCGCTGAAATGGGTCGTGATGCTCGCGCCGCTCGCGCTGGTCTTCTTCCTGAGCTTCCGCATCCACACGATGAGCGTATCGGCCGCGCAGGCGACCTTCTGGGTCTATGCGGGCCTGATGGGCCTGTCGCTGTCGTCGATCTTCCTGATCTACACCGGCGCCAGCATCGCGCAGACCTTCTTCGTCTCGGCCGCCGCCTTCGGCGCGCTGTCGCTCTACGGCTACACGACGAAGCGTAACCTCTCCGCGATCGGCTCGTTCCTGATCATGGGCCTCTTCGGCCTGATCATCGCCTCGCTCGTCAACCTGTTCCTGCAGTCCTCGGCGCTCGACTTCGCGATCTCCGCGATCGGTGTCCTGGTCTTTGCAGGCCTGACGGCCTGGGATACGCAGAAGATCAAGGAAATGTACTTCGAAGCCGATGACGTCGCCGTGGCCGGCCGCAAGGCCATCATGGGCGCGCTGACGCTCTACCTCGACTTCATCAACCTCTTCCTGTTCCTGCTGCGCTTCCTCGGCAACCGCGATTGA
PROTEIN sequence
Length: 248
MADLRNYQTRTANTGTQAGAVIDEGLRAYMLRVYNLMALGLAITGVVAFFASQAAFSGGQLTAFGQAIYLSPLKWVVMLAPLALVFFLSFRIHTMSVSAAQATFWVYAGLMGLSLSSIFLIYTGASIAQTFFVSAAAFGALSLYGYTTKRNLSAIGSFLIMGLFGLIIASLVNLFLQSSALDFAISAIGVLVFAGLTAWDTQKIKEMYFEADDVAVAGRKAIMGALTLYLDFINLFLFLLRFLGNRD*