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SCNpilot_expt_1000_bf_scaffold_2043_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(11216..11641)

Top 3 Functional Annotations

Value Algorithm Source
Binding protein component of sugar ABC transporter n=1 Tax=Rhodobacter sp. SW2 RepID=C8RZX4_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 135.0
  • Bit_score: 169
  • Evalue 2.90e-39
Binding protein component of sugar ABC transporter {ECO:0000313|EMBL:EEW25583.1}; Flags: Precursor;; TaxID=371731 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. SW2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 135.0
  • Bit_score: 169
  • Evalue 4.10e-39
sugar ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 133.0
  • Bit_score: 156
  • Evalue 4.70e-36

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Taxonomy

Rhodobacter sp. SW2 → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 426
GTGGCGGGCACCGCCGATTCCAACTGGGACGCGACGACGGCGCGCAACGCGGCCGCCACCATCCTCCAGCAGCATCCCGACGTCTGCGGCATCGTCGACTTCTGGGATGCGACGGCGCAGGGCACCGCATCGGCGATCCGCGACGCCGGCCTCAAGGACAAGATCTTCCTCGCCACGCCGGGATCGGGCGAGGCCATCGACTCCAAGCTGCTGGAGGACGGCACCTTCGGCGCCATCGTGACCAGCGAGCTGCCGCGCCAGTCGCAGGACGTCGTGGCGGCGATCAAGATCCTGCTCCAGAGCGGCATCAAGCCGGGCGAGAGCAAGAACTACCTCTATACGCACGAGATCGCCCGCACCAAGAAGGACGTCGCGCCCGGCACCTGCTGGAGCCAGGCCGAGATCGAGGCCGCCGCCAAGAAATGA
PROTEIN sequence
Length: 142
VAGTADSNWDATTARNAAATILQQHPDVCGIVDFWDATAQGTASAIRDAGLKDKIFLATPGSGEAIDSKLLEDGTFGAIVTSELPRQSQDVVAAIKILLQSGIKPGESKNYLYTHEIARTKKDVAPGTCWSQAEIEAAAKK*