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SCNpilot_expt_1000_bf_scaffold_12528_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5861..6313)

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHP1_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 94.0
  • Coverage: 150.0
  • Bit_score: 276
  • Evalue 1.80e-71
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR78968.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 150.0
  • Bit_score: 276
  • Evalue 2.50e-71
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 149.0
  • Bit_score: 193
  • Evalue 4.90e-47

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGACGGCGGACCGGTTCAGCGAGCTCATCTCGCTGCGTGCCGTCCTCGAGCAGCACGCAGCCCGCCGCGCCGTCCCGCACATTACCGAACGCCGCATCGACCGTCTCGCCGAGATCGACAAGGCGCAGGACGAGGCGATCTCGCGCAAGGACGACGCGACCGCGCTGCTGCTGAACCAGGAATTCCATCGCACGCTATACACCGCCAATCCCGAGCAGGTGATCATGCCTATGGTGGAGAGCATCTGGCTGCAGCTCGGCCCGTTCCTCGGCATCGCCATGGAGCACGTCGCCCAGCTCTATGTCGTCGACCGACACCAGGAGGCGATCGCGGCCCTGCGCAAGCGCGACGAGGACGCCGTGGCCGCCGCGATCCGCGCCGACATCTCCGAGGGCATCGGCGGCTTCGAGCGCGCGGCCATCGAGAACCTGCTGCGGCTCGCCGGTCAGTAG
PROTEIN sequence
Length: 151
MTADRFSELISLRAVLEQHAARRAVPHITERRIDRLAEIDKAQDEAISRKDDATALLLNQEFHRTLYTANPEQVIMPMVESIWLQLGPFLGIAMEHVAQLYVVDRHQEAIAALRKRDEDAVAAAIRADISEGIGGFERAAIENLLRLAGQ*