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SCNpilot_expt_1000_bf_scaffold_12528_curated

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_12528_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..2506
DNA (2505bp) protein (835aa)
Betaine aldehyde dehydrogenase BetB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5BXS4_9RHIZ rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:EYR78973.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
gabD7; succinate-semialdehyde dehydrogenase [NADP+] GabD (EC:1.2.1.79) rbh
SCNpilot_expt_1000_bf_scaffold_12528_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2661..3035)
DNA (375bp) protein (125aa)
Lysine 6-dehydrogenase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHU7_9RHIZ
Saccharopine dehydrogenase {ECO:0000313|EMBL:EYR78971.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
saccharopine dehydrogenase
SCNpilot_expt_1000_bf_scaffold_12528_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3871..4323
DNA (453bp) protein (151aa)
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EYR78970.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
AsnC family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI0003762CD8
Transcription regulator AsnC family
SCNpilot_expt_1000_bf_scaffold_12528_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4550..5119)
DNA (570bp) protein (190aa)
D-amino acid dehydrogenase small subunit n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CRV7_9RHIZ rbh
D-amino acid dehydrogenase small subunit {ECO:0000313|EMBL:EYR78969.1}; EC=1.4.99.1 {ECO:0000313|EMBL:EYR78969.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
FAD dependent oxidoreductase; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
SCNpilot_expt_1000_bf_scaffold_12528_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5861..6313)
DNA (453bp) protein (151aa)
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHP1_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR78968.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_12528_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6310..6528)
DNA (219bp) protein (73aa)
GntR family transcriptional regulator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CHP1_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EYR78968.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
transcriptional regulator
SCNpilot_expt_1000_bf_scaffold_12528_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6669..7556
DNA (888bp) protein (296aa)
Gamma-glutamylputrescine synthetase PuuA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX14_9RHIZ rbh
Gamma-glutamylputrescine synthetase PuuA {ECO:0000313|EMBL:EYR78967.1}; EC=6.3.1.11 {ECO:0000313|EMBL:EYR78967.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
glutamine synthetase rbh
Displaying 7 items

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