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SCNpilot_expt_1000_bf_scaffold_12528_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6669..7556

Top 3 Functional Annotations

Value Algorithm Source
Gamma-glutamylputrescine synthetase PuuA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CX14_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 296.0
  • Bit_score: 578
  • Evalue 3.30e-162
  • rbh
Gamma-glutamylputrescine synthetase PuuA {ECO:0000313|EMBL:EYR78967.1}; EC=6.3.1.11 {ECO:0000313|EMBL:EYR78967.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 296.0
  • Bit_score: 578
  • Evalue 4.70e-162
glutamine synthetase similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 294.0
  • Bit_score: 492
  • Evalue 7.60e-137
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACGCCGAACGACGATTCCGACTGGCTCATCAATGCCGACGGCGTGGAAAGCATCCAAGCCGTCGTCTGCGACCTCAACGGCATCCTGAGGGGCAAGCGCGTGCCCGTCGGGCAGGCGCAGAAGGTGCTGAAGGGCGGCATCCGCATGCCGCTTTCCATCGTCGGCGTCGACGTGTGGGGCGAGGACATCGTCGGCTCCAGCCACGTCTTCGCCTCGGGCGACATGGACGGCATCTGCGCGGCGACCGGCCGCGGCGCGCTGCCTGTGAGCTGGACGCTGAAGCCCTCCGCCGTCGTGCCGCTGTGGCTGTTCAAGGAGAGCGGTGAGCCCTTCCTTGCCGATCCGCGCCAGGCGCTCGCCCATATCGTGCGGCAGTACAACGAACTCGGCCTTCGTCCGGTCGTCGCCTCCGAGATGGAATTCTACCTGATCGACGCCGAGCCCGACCATGCCGAGCCGCCGATCTCGCCCTATACCGGCAAGCGCCTCGATTCCGACGCGATCCTCTCCATCGACGAGCTCGACGACTTCGGCCAGTTCTTCTCCGACGTCTATGCGGAATGCGAGCGGCAGAACGTGCCGGCGGATTCGGCGGTGGCGGAAAACGGCATCGGCCAGTTCGAGATCAACCTCGTCCATTCCGACGATCCGCTGAAGGCGGCGGACGACGCGCTGTTCTTCAAGCGCATCATCAAGGGCGTCGCGCGCAAGCACGGCTTTGCCGCCACCTTCATGGCCAAGCCCTACGGTATGCGCTCGGGCAGCGGCATGCACATGCATTTCTCGGTGATCGACGAGGACGGCAACAACGTCTTCGACGACGGCACGCCCGAGGGATCGGCGATCATGAAGCATGCCGTGGCCGGCCTGACGCGCGGCATGGCG
PROTEIN sequence
Length: 296
MTPNDDSDWLINADGVESIQAVVCDLNGILRGKRVPVGQAQKVLKGGIRMPLSIVGVDVWGEDIVGSSHVFASGDMDGICAATGRGALPVSWTLKPSAVVPLWLFKESGEPFLADPRQALAHIVRQYNELGLRPVVASEMEFYLIDAEPDHAEPPISPYTGKRLDSDAILSIDELDDFGQFFSDVYAECERQNVPADSAVAENGIGQFEINLVHSDDPLKAADDALFFKRIIKGVARKHGFAATFMAKPYGMRSGSGMHMHFSVIDEDGNNVFDDGTPEGSAIMKHAVAGLTRGMA