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SCNpilot_expt_1000_bf_scaffold_1731_curated_14

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12321..13373)

Top 3 Functional Annotations

Value Algorithm Source
Putative endonuclease {ECO:0000313|EMBL:EYR80574.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 350.0
  • Bit_score: 712
  • Evalue 3.20e-202
putative endonuclease similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 350.0
  • Bit_score: 696
  • Evalue 4.10e-198
  • rbh
Putative endonuclease n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3M8X9_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 93.4
  • Coverage: 350.0
  • Bit_score: 696
  • Evalue 1.30e-197
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1053
ATGAAGACGATCAAGGGCCCCGGTCTGTTTCTCGCACAGTTCGCGGGCGATGCCGCGCCGTTCAACTCCTGGGACTCGATCACAAAATGGGCGGCCGACATCGGCTACAGGGGCGTGCAGGTCCCGACCTGGGACGCGCGCCTCATCGACCTGAAGAAGGCGGCGGAATCCAGGGCCTATTGCGACGAATTCGCCGGCAAGGCGCGGGAGAACGGCGTCGAGATCACCGAGCTTTCCACCCATCTGCAGGGCCAGCTCGTCGCCGTGCATCCGGCCTATGACGAGGCCTTCGACGGCTTTGCCGTGCCGGAAGTGCGCGGCAATCCGAAGGCGCGGCAGGCCTGGGCGGTGGAGCAGGTGAAGCTGGCGCTGACGGCCTCGAAGAATCTCGGTCTCGATGCGATGGCCAGCTTCTCCGGCGCGCTCGCCTGGCCCTTCGTCTATCCCTGGCCGCAGCGTCCCGCCGGCCTCGTCGAAACGGCCTTCGACGAACTGGCGAAGCGCTGGACGCCGATCCTCGACCATGCGGAAGAGAACGGCGTCGACATCTGCTACGAGATCCATCCGGGCGAGGACCTGCACGACGGCATCACCTACGAGATGTTCCTGGAGCGCACCGGCAACCATGCCCGCGCCTGCATGCTCTATGACCCCTCGCACTATGTCCTTCAGTGCCTCGACTATCTCGACAATATCGACATCTACAAGGACCGCATCCGCATGTTCCATGTGAAGGATGCCGAGTTCAACCCGACGGGCCGGCAGGGCGTCTATGGCGGCTACCAGAGCTGGGTGAACCGCGCCGGCCGTTTCCGCTCGCTTGGGGACGGGCAGGTGGATTTCGGCGCCGTCTTCTCCAAGATGGCTGCGAACGATTTCGCCGGCTGGGCCGTGGTCGAGTGGGAATGCGCGCTGAAGCACCCGGAGGACGGGGCGCGGGAGGGAGCGGAGTTCGTCAAGGCGCATATCATCCGCGTGACGGAGAAGGCGTTCGATGATTTTGCCGATGCCGGGACAGACCAGGCGGCGAACCGGCGCATGCTCGGGCTTTAG
PROTEIN sequence
Length: 351
MKTIKGPGLFLAQFAGDAAPFNSWDSITKWAADIGYRGVQVPTWDARLIDLKKAAESRAYCDEFAGKARENGVEITELSTHLQGQLVAVHPAYDEAFDGFAVPEVRGNPKARQAWAVEQVKLALTASKNLGLDAMASFSGALAWPFVYPWPQRPAGLVETAFDELAKRWTPILDHAEENGVDICYEIHPGEDLHDGITYEMFLERTGNHARACMLYDPSHYVLQCLDYLDNIDIYKDRIRMFHVKDAEFNPTGRQGVYGGYQSWVNRAGRFRSLGDGQVDFGAVFSKMAANDFAGWAVVEWECALKHPEDGAREGAEFVKAHIIRVTEKAFDDFADAGTDQAANRRMLGL*