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SCNpilot_expt_1000_bf_scaffold_1731_curated_15

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(13689..14639)

Top 3 Functional Annotations

Value Algorithm Source
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:KEC80160.1}; TaxID=1408224 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 317.0
  • Bit_score: 584
  • Evalue 9.10e-164
D-ribose-binding periplasmic protein precursor; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 91.8
  • Coverage: 317.0
  • Bit_score: 579
  • Evalue 6.60e-163
  • rbh
D-ribose-binding periplasmic protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KKL6_RHISN similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 317.0
  • Bit_score: 579
  • Evalue 2.10e-162
  • rbh

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Taxonomy

Sinorhizobium americanum → Sinorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 951
ATGCGCAAGAAACTACTCGGCCTGACGGTCGCGGCCATGGCGCTCATCGCCTGTGCCGTCCATGCGGAAGACAAGAAGGTGACGATCGGCGTGTCGATCCCAGCCGCCGACCACGGCTGGACGGCGGGCGTCGTCTACCACGCCGAGCGCGTCGCCAAGCTCCTGATGGAGCGCAATCCGGGCCTCAACGTCATCGTCAAGACCTCGCCGGATCCGGCAAGCCAGGCGAATGCCGTACAGGACCTCGAAACGCAGGGCATCGACGCGCTCGTCATCCTGCCGACCGACCCGGATCCGCTGGTCAACGCCATCAAGGAAGTCAAGGGCAAGGGCACCTTCGTCGCGCTCGTCGACCGTGCGCCGAGCGCCAACGACAATTCCGTGCGTGACCTCTACGTCGCCGGCAACAACTTCGCCCTCGGCCAGACGGCCGGTGAATATATCAAGACCACGACGCCGGATGCCGAAGTCGTCGTTATCAGGGGCATGGCGATCCCGATCGACCAGCAGCGCCAGGATGGTTTCGACAAGGGCATCGAGGGCTCGAACGTCAAGGTCCTCGACCGCCAGTACGGCAACTGGAACCGCGACGATGCCTTCAAGGTCATGCAGGACTACCTGACGAAGTACCAGAAGATCGACGTCGTATGGTGCCAGGACGACGACATGGCCGTCGGCGTCCTGCAGGCCATCGAGCAGGCCGGCCGCACGGACATCCAGTATGTCATCGCCGGCGCCGGCTCGAAGGACATGATCAAGAAGGTCATGGACGGCGACAAGATGATCCCGGTCGACGTGCTCTATCCGCCGGCAATGGTCGGCACCGCGCTCGAAATGACCGCCGCCAACTTCTACGGCCAGGTCCCGGTCCGCGGCGTCTACACCATCGACGCCACGCTGGTGACGAAGGACAACGCGAAGGACTTCTACTTCCCCGATTCCCCGTTCTGA
PROTEIN sequence
Length: 317
MRKKLLGLTVAAMALIACAVHAEDKKVTIGVSIPAADHGWTAGVVYHAERVAKLLMERNPGLNVIVKTSPDPASQANAVQDLETQGIDALVILPTDPDPLVNAIKEVKGKGTFVALVDRAPSANDNSVRDLYVAGNNFALGQTAGEYIKTTTPDAEVVVIRGMAIPIDQQRQDGFDKGIEGSNVKVLDRQYGNWNRDDAFKVMQDYLTKYQKIDVVWCQDDDMAVGVLQAIEQAGRTDIQYVIAGAGSKDMIKKVMDGDKMIPVDVLYPPAMVGTALEMTAANFYGQVPVRGVYTIDATLVTKDNAKDFYFPDSPF*