ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4305_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 5986..6783

Top 3 Functional Annotations

Value Algorithm Source
Putative sulfate transport system permease protein CysT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA84_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 265.0
  • Bit_score: 502
  • Evalue 2.10e-139
  • rbh
Putative sulfate transport system permease protein CysT {ECO:0000313|EMBL:EYR77375.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 265.0
  • Bit_score: 502
  • Evalue 2.90e-139
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 87.5
  • Coverage: 263.0
  • Bit_score: 465
  • Evalue 8.90e-129
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
ATGAACACGCTGCTGCAACGGCTCTATTTCTGCCTCATCGGCCTGTTCCTTTCGCTGCCGATCATCGTCGTCGCCGGCGTCTCGGTGAACGAGAAGCAGACGCTCGCCTTCCCGCCGCAGGGTTTTTCGCTCGGCTGGTACGGCGAGATCTTCGCCAATGTCGAATGGCGCAACGCCCTTTTCGCCTCCATCACGCTCGCCGCGCTCTCCGCCGCCGTGGCGCTCCTGATCGCGCTTCCGCTCGCCTGGTTCCTCTGGCGGCGCGATGCGCCCTGGGCGAACATCTTCCAGCTGCTCGGCATCGCGCCCTTCACGCTGCCGCCGGTCATCACCGCGCTTGGCCTCCTCACCTTCTGGGCGACGACGGGCTTCTACGGCCAGCCGGCGACGGCCGTGATCAGCCATGCCATCTTCTTCGTGACGCTGCCGCTGGTGACGCTCTCGCTCGGCTTCTCCTCCATCGACCGCTCGCTTGTGGAAGCGGCCGCGACGATGGGGGCGGACGACCGCACGATCTTCCGCACGGTGGTCCTGCCGCTGATCCTGCCCTATCTCGTCTCCGGCTATGCTTTCGCCTTCGTCCTGTCGCTCAACGAATATATCGTGGCCTACATGACGATCGGCTTCACGATGGAGACGCTGCCGATCAAGATCTTCAACGCGCTGCGTTACGGCTATACGCCGACGATGGCCTCGGTCACGATCCTCTTCGTGGCGATCGCCGCCGTCATCTTCGGCCTCGTCGCGCGCTTCGGCGACCTGCCGAAGCTGCTCGGCGCCATGTCGTCGCGGGATTGA
PROTEIN sequence
Length: 266
MNTLLQRLYFCLIGLFLSLPIIVVAGVSVNEKQTLAFPPQGFSLGWYGEIFANVEWRNALFASITLAALSAAVALLIALPLAWFLWRRDAPWANIFQLLGIAPFTLPPVITALGLLTFWATTGFYGQPATAVISHAIFFVTLPLVTLSLGFSSIDRSLVEAAATMGADDRTIFRTVVLPLILPYLVSGYAFAFVLSLNEYIVAYMTIGFTMETLPIKIFNALRYGYTPTMASVTILFVAIAAVIFGLVARFGDLPKLLGAMSSRD*