name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_expt_1000_bf_scaffold_4305_curated_1
unknown
|
Not on your lists |
3..104
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(161..373)
|
Copper chaperone n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CP48_9RHIZ
Copper chaperone {ECO:0000313|EMBL:EYR77367.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
heavy metal transport protein; K07213 copper chaperone
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(450..1289)
|
Aspartate aminotransferase AspC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEJ3_9RHIZ
rbh
Aspartate aminotransferase AspC {ECO:0000313|EMBL:EYR77369.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EYR77369.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aspartate transaminase (EC:2.6.1.1)
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1256..1588)
|
Aspartate aminotransferase AspC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CEJ3_9RHIZ
Aspartate aminotransferase AspC {ECO:0000313|EMBL:EYR77369.1}; EC=2.6.1.1 {ECO:0000313|EMBL:EYR77369.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
aspartate transaminase (EC:2.6.1.1)
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1604..2620)
|
Glycine cleavage system transcriptional activator n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNV6_9RHIZ
rbh
Glycine cleavage system transcriptional activator {ECO:0000313|EMBL:EYR77370.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Transcription regulator LysR family
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_6
unknown
|
Not on your lists |
comp(2662..2898)
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2927..4015
|
Extracellular solute-binding protein, ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EH24_9RHIZ
rbh
Spermidine/putrescine-binding periplasmic protein {ECO:0000313|EMBL:EYR77372.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Extracellular solute-binding protein, ABC transporter
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4104..5138
|
ABC-type spermidine/putrescine transport systemATPase component {ECO:0000313|EMBL:EYR77373.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
spermidine/putrescine ABC transporter ATPase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_9
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5135..5989
|
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES42_9RHIZ
rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:EYR77374.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter permease
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_10
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5986..6783
|
Putative sulfate transport system permease protein CysT n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CA84_9RHIZ
rbh
Putative sulfate transport system permease protein CysT {ECO:0000313|EMBL:EYR77375.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transport systems inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_11
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6828..7610
|
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CQ30_9RHIZ
rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR77376.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_12
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7647..7895)
|
Amidohydrolase 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUK4_9RHIZ
Amidohydrolase 3 {ECO:0000313|EMBL:EYR77378.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Amidohydrolase 3; K07047
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_13
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7892..9049)
|
Amidohydrolase 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUK4_9RHIZ
rbh
Amidohydrolase 3 {ECO:0000313|EMBL:EYR77378.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative TIM-barrel fold metal-dependent hydrolase
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_14
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9295..9603)
|
6-aminohexanoate-dimer hydrolase NylB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ES37_9RHIZ
6-aminohexanoate-dimer hydrolase NylB {ECO:0000313|EMBL:EYR77379.1}; EC=3.5.1.46 {ECO:0000313|EMBL:EYR77379.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
6-aminohexanoate-dimer hydrolase (EC:3.5.1.46)
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_15
unknown
|
Not on your lists |
9794..10543
|
This feature has no annotations |
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_16
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10510..11550)
|
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Putrescine-binding periplasmic protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4FAM8_9RHIZ
rbh
family 1 extracellular solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein
rbh
|
|
SCNpilot_expt_1000_bf_scaffold_4305_curated_17
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11553..12167)
|
Putrescine transport system permease protein PotI n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CCS3_9RHIZ
rbh
Putrescine transport system permease protein PotI {ECO:0000313|EMBL:EYR77381.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
binding-protein-dependent transporters inner membrane component; K02053 putative spermidine/putrescine transport system permease protein
rbh
|