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SCNpilot_expt_1000_bf_scaffold_16359_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3122..4090)

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003819B4C similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 308.0
  • Bit_score: 279
  • Evalue 6.00e-72
mcpZf1; methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 308.0
  • Bit_score: 274
  • Evalue 6.00e-71
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGS26340.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.1
  • Coverage: 308.0
  • Bit_score: 274
  • Evalue 2.70e-70

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Taxonomy

Rhizobium etli → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 969
ATGTTTGAAAAGCTGTTGTCGCGGGTTCGCATCCAGACGAAGGTCTTCATCTTCGTCATACCTTTCATCCTGAGCATTGCCGCCGTCGGAATCACGGGCTTCTACACGTCCGGCCTGCTGCAAGCCCGCATGGAGATTTCCAACTCCGTTCTCCAGGCCTTGAGCGGCTTTCGCGACCTCTCGGCGGCAATGACAAAATTCCTGGAAGCGGCGTCAGAGGAGAGCCGCGACCAGGTCGCGGAGAGGCTGGTGTCGCAGCAATCCCTGTTGCGGGAAGGGCTCCAGCAACTCGATCCGACCGCCGAGGGGCGTGACGATCTTGAAAGCGCCGTAACGTCCATCGATGGGATTTCGGCGCGGATGGGATCGCTTTGGGATCTGCATGTCAAAACAACGGGCCTGGCGAACGATCTCCAACGAGCCCAGAGCGCAATCGTTTCGGCTCAGTTCGATATCGCGGAGGGAATGAAGGTCGTTCAGCGCACGGCGGACGAGGAGGAGACGGTCGCGCGCAATCTGCTCCGCGATGCCGACCGTATCACCGAGCTTGCATCTTTCGCGGCGCGCCTGCGCGAAGAGGTGGCCAAAGCCACTGGTCCTAAAGCCAAATTCTCCGCCGTATCGGCTAGCATGAAGGAACTGATCCGCCATCAGCGAATGCTCGGCATGTCGCTGCCCTCCGGCGAAACGGCGATTCGACAGGTGGTCGCCGATGTTGCCGCGAAGCTGAAATCGACCGTGGAGGCAAACGACATATCGATGGAACGCGCTGCCGGCCTGGAAGAAGCTCTGGGATCCCTGGTTGCTGTCAAGGGTGCACTCGAAGCCGCGGCAGACCAGAAAATCAAGCAGGCGACGAAGAAGTTCGCAGAGAGCGTCGAGCCGGTCGAAAAGGCGCGAACGGCCCAACGGGATGGACAGAAGCNNNNNNNNNNNNNNNNNNNNNNNNNTACGCTATCCAGATACTGA
PROTEIN sequence
Length: 323
MFEKLLSRVRIQTKVFIFVIPFILSIAAVGITGFYTSGLLQARMEISNSVLQALSGFRDLSAAMTKFLEAASEESRDQVAERLVSQQSLLREGLQQLDPTAEGRDDLESAVTSIDGISARMGSLWDLHVKTTGLANDLQRAQSAIVSAQFDIAEGMKVVQRTADEEETVARNLLRDADRITELASFAARLREEVAKATGPKAKFSAVSASMKELIRHQRMLGMSLPSGETAIRQVVADVAAKLKSTVEANDISMERAAGLEEALGSLVAVKGALEAAADQKIKQATKKFAESVEPVEKARTAQRDGQKXXXXXXXXXTLSRY*