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SCNpilot_expt_1000_bf_scaffold_3602_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3217..3780

Top 3 Functional Annotations

Value Algorithm Source
grpE; molecular chaperone heat shock protein (hsp-70) similarity KEGG
DB: KEGG
  • Identity: 58.0
  • Coverage: 174.0
  • Bit_score: 213
  • Evalue 5.60e-53
Protein GrpE n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP31_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 58.0
  • Coverage: 174.0
  • Bit_score: 213
  • Evalue 1.80e-52
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 174.0
  • Bit_score: 213
  • Evalue 2.50e-52

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Taxonomy

Agrobacterium tumefaciens → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 564
ATGAGCGGACCCATCAAATCTGAAGAAGCGGGATCGGAAACATCGCGCGACGAACCCGGCGAAGCCGCCGTCGAGGCCGTTGCGAGGCTGGAAACGGAGGTCGCCGACCTCAAGGATCGCCTGTTGCGGGCGCTGGCCGAGACGGAGAACCTGCGCCGCCGCGCTGCGCGTGACGTCGATGACGCTAGGCAATTTGGCATCGGCAAGTTCGCCGGCGATCTCGTCGGCGTTGCCGACAATCTGGAGCGCGCCCTTGCCAGCGTGCCGACGGAGATCGAGCATGGGGCGACGGCTCTGAAGACACTCGCCGATGGCGTCGCTTTGACGGGCAAGAATTTGATGCAGGTTTTCGAGAAACACGGCATCCGCCGGATAGAGCCGCTCGGCGAGCGTTTCGATCCGAACATCCATGAGGCTTTGTTCGAGACGGCCGACCCTTCGGTGCCGAACGGGACCGTTAGCACCGTCGTGTCGCCGGGTTATGCTATCGGTACGCGGCCGCTCAGGGCCGCTAAGGTTGGTATTGCGCGCGGCGGGCCGCCCGCCGTCCAGAAAAAAGGTTAA
PROTEIN sequence
Length: 188
MSGPIKSEEAGSETSRDEPGEAAVEAVARLETEVADLKDRLLRALAETENLRRRAARDVDDARQFGIGKFAGDLVGVADNLERALASVPTEIEHGATALKTLADGVALTGKNLMQVFEKHGIRRIEPLGERFDPNIHEALFETADPSVPNGTVSTVVSPGYAIGTRPLRAAKVGIARGGPPAVQKKG*