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SCNpilot_expt_1000_bf_scaffold_3602_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3777..4319)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:GAJ93457.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 275
  • Evalue 4.00e-71
mechanosensitive ion channel protein similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 274
  • Evalue 2.60e-71
Mechanosensitive ion channel protein n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JP32_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 182.0
  • Bit_score: 274
  • Evalue 8.20e-71

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGATCCAGATTTTCGACCCGACCCAGTTTCCCGGCGCACTTCTCTATGCCGGCATCTTCATTGTCATCGGCCTTTGCCTGTCATGGATGGTGCGGCGGCTTGTGGTGGAAGCCCTGCGGCATGACAAATCGGAACATATCGACCAGATCACCCTGTCCTTTCTCAGTCATCTCGGCATCCTCGTCATCTGGGTCTTGCTCGCCACGTTCTATGCACATCTCGTTCCCGCGCTGAACCGGCTCGGCACGGCGCTTCTCGCCGGCGTCAGCCTCATGTCCGTCATTCTCGGTTTTGCGGCGCAGACGACACTTGGCAACCTCGTCGCCGGCATCAGCCTGATCCTCTACAAACCCTTCCGGCGCGGCGACCGCCTGCAGATCCAGGCACCGACGGGGCTTGAGACCGGCGCGGTCGAGGACATCTCGCTCGGCTATACCGTGCTGCGGACAGATGACGACAGGCGCGTGATCATCGCCAACACGGCCATGGCGCAGCAGACCATGATCAAGCTCGCCCCCTCGGCCGGAACCAGCGGGCCTTAA
PROTEIN sequence
Length: 181
MIQIFDPTQFPGALLYAGIFIVIGLCLSWMVRRLVVEALRHDKSEHIDQITLSFLSHLGILVIWVLLATFYAHLVPALNRLGTALLAGVSLMSVILGFAAQTTLGNLVAGISLILYKPFRRGDRLQIQAPTGLETGAVEDISLGYTVLRTDDDRRVIIANTAMAQQTMIKLAPSAGTSGP*