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SCNpilot_expt_1000_bf_scaffold_2746_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6736..8253)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system ATPase component {ECO:0000313|EMBL:EYR82576.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 506.0
  • Bit_score: 889
  • Evalue 2.80e-255
sugar ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037480DF similarity UNIREF
DB: UNIREF100
  • Identity: 79.3
  • Coverage: 507.0
  • Bit_score: 794
  • Evalue 5.10e-227
  • rbh
ytfR; ABC transporter ATP-binding protein YtfR similarity KEGG
DB: KEGG
  • Identity: 79.0
  • Coverage: 505.0
  • Bit_score: 792
  • Evalue 7.90e-227
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1518
ATGCTGCCTGACAATTCTCATGTTCTCTCGGCGACGGGGATCGACAAGATCTTCCCGGGCGCCAGGGCGTTGAACCGCGTCGATTTCTCCCTGCGGCGCGGCGAGGTTCATGCGCTGCTCGGCGAGAACGGCGCCGGCAAGTCGACGCTCGTCAAATGCCTGACCGGCGCCTATCGCCGCGACGGCGGACGCATCCTCATCGACGGCGTGGACGCCGATCCGCAGGGCACGCTGGAGGCGCAGAACCTCGGCATCGGCACGGTCTACCAGGAGGTGAATCTCCTGCCGAACCTCACCGTCGCCGAAAACCTCTTCCTCGGCCGCCAGCCGAAGCGCTTCGGCCTCGTCAACGCCCGCGAGATGAACCGCCGCGCCAGGGCGCTGCTGGCGGAATACGAGCTCGACATCGACGTCACCGCCGAGCTTGCCGCCTATTCCGTCGCGGTGCAGCAGGTCGTCGCCATCGCCCGGGCCGTCGATCTCTCCGGCAAGGTGCTGATCCTCGACGAGCCGACCGCCAGCCTCGACGCCCACGAGGTCGCAATGCTCTTCCGCATCGTGCGCCGGCTCAAGGAACGCGGCCTCGGCATAATCTTCATCACCCACTTCCTCGAACAGGTCTACGAGATCTCCGACCGCATCACCGTGCTGCGCAATGGCCAGCTCGTCGGCACGCGCGAGACGGCGGAGCTTTCGCGCCGCGAGCTGATCGCCATGATGCTCGGCCGCGAGCTGGTGCAGGAAGTCGCCGCCGAGCATGGCGCGAAGAGCGAGGCCGGGCAGGTGCGCTTCCGCTTCCGCGGCTTCGGCCGCAAGGGCCATATCCAGCCCTTCGACCTCGACGTGCGCGCCGGCGAGGTCGTCGGCATCGCCGGCCTGCTCGGCTCGGGCCGCACGGAGACGGCGGAAATCCTCTTCGGCGCCGAGCGCGCCGACAGCGGCACGGCGGAGGCGGACGGGCGCGCGCTCGACCTTGCCTCGCCGCGCGCCGCCATCCGCGAGAAATTCGGCTTCTGTCCGGAAGACCGCAAGGTCGACGGCATCATCGGCGACCTCTCGGTGCGGGAGAATATCGCGCTGGCGCTCCAGGCGCGGCGCGGCTGGGCGCGGCCGATCAGCCGCAGCGAGCAGGACCGGCTCGCCGACGATTACATCAAGGCGCTCGACATCCGCACCAGCGACCGGGAAAAGCCGATCAAGCTGCTCTCCGGCGGCAACCAGCAGAAGGCGATCCTCGCCCGCTGGCTCGCCACCAACCCGGATTTCCTGATCCTCGACGAGCCGACGCGCGGCATCGACGTCGGCGCCCATGCGGAGATCATCCGTCTCATCGAATCCCTCTGCGAGAAAGGCATGTCGCTGATCGTGATCTCCTCCGAACTCGAAGAGCTCGTCGCCTATTCGAGCCGCGTCATCGTGCTGCGCGACCGGGCGCATGTGGCGGAACTGACCGGCGAGAAGGTCACGACAGAGGGTATCGTCGAAGCCATCGCAGCCGGCGGGAGGGCGGACGCATGA
PROTEIN sequence
Length: 506
MLPDNSHVLSATGIDKIFPGARALNRVDFSLRRGEVHALLGENGAGKSTLVKCLTGAYRRDGGRILIDGVDADPQGTLEAQNLGIGTVYQEVNLLPNLTVAENLFLGRQPKRFGLVNAREMNRRARALLAEYELDIDVTAELAAYSVAVQQVVAIARAVDLSGKVLILDEPTASLDAHEVAMLFRIVRRLKERGLGIIFITHFLEQVYEISDRITVLRNGQLVGTRETAELSRRELIAMMLGRELVQEVAAEHGAKSEAGQVRFRFRGFGRKGHIQPFDLDVRAGEVVGIAGLLGSGRTETAEILFGAERADSGTAEADGRALDLASPRAAIREKFGFCPEDRKVDGIIGDLSVRENIALALQARRGWARPISRSEQDRLADDYIKALDIRTSDREKPIKLLSGGNQQKAILARWLATNPDFLILDEPTRGIDVGAHAEIIRLIESLCEKGMSLIVISSELEELVAYSSRVIVLRDRAHVAELTGEKVTTEGIVEAIAAGGRADA*