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SCNpilot_expt_1000_bf_scaffold_2746_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(8348..9310)

Top 3 Functional Annotations

Value Algorithm Source
Putative pentose monosaccharide ABC transporter,periplasmic solute-binding protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CNC8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 320.0
  • Bit_score: 600
  • Evalue 8.90e-169
  • rbh
Putative pentose monosaccharide ABC transporter,periplasmic solute-binding protein {ECO:0000313|EMBL:EYR82577.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.0
  • Coverage: 320.0
  • Bit_score: 600
  • Evalue 1.20e-168
ABC-type sugar transport system, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 91.2
  • Coverage: 320.0
  • Bit_score: 576
  • Evalue 5.70e-162
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGAAATTCACAACCGCACTCGCGAGTGCCACGATCCTTGCCGCCTCCATGTTCGGTGTCGCGTCCGCGGCCGACATGACCGTGGGCTTTTCGCAGATCGGCTCGGAATCCGGCTGGCGCGCGGCAGAGACGACGCTCACCAAGCAGCAGGCCGAGCAGCGCGGCATCGACCTGAAATTCGCCGATGCGCAGCAGAAGCAGGAAAACCAGATCAAGGCGCTGCGCTCCTTCATCGCGCAGGGCGTCGACGCCATCCTCGTCGCGCCGGTCGTCGCGACGGGCTGGGACGAGGTGCTGCAGGAAGCCAAGGACGCGGAAATCCCGGTCATCCTGCTCGACCGCAAGGTCGATGCGTCGGACGATCTCTACATGACCGCCGTGACCTCCGACACCGTCCATGAGGGCAATGTCGCCGGCAAGTGGCTGGTGGACACGGTCGCCGGCAAGCCCTGCAACGTCGTCGAGCTCCAGGGCACGACCGGCTCCTCGCCGGCCATCGACCGCAAGAAGGGCTTCGAGGACGCCATCGCCGGCCATGACAACCTGAAGATCGTCCGCAGCCAGACCGGCGACTTCACCCGCACGAAGGGCAAGGAAGTCATGGAAAGCTTCCTGAAGGCGGAAGACGGCGGCAAGAACATCTGTGCGCTCTACGCCCATAACGACGACATGGCCGTCGGCGCCATCCAGGCGATCAAGGAAGCCGGCCTGAAGCCGGGCACGGATATCCTCGTCGTCTCCATCGACGCCGTTCCGGATATCTTCCAGGCCATGGCCGCCGGCGAGGCGAACGCCACCGTGGAACTGACGCCGAACATGGCCGGCCCCGCCTTCGACGCGCTCGACGCCTTCCGCAAGGACGGCACGACCCCGCCGAAGTGGATCCAGACGGAATCCAAGCTCTATACCCAGGCCGACGATCCGGCCAAGGTATACGAGGAGAAGAAGGGTCTCGGCTACTGA
PROTEIN sequence
Length: 321
MKFTTALASATILAASMFGVASAADMTVGFSQIGSESGWRAAETTLTKQQAEQRGIDLKFADAQQKQENQIKALRSFIAQGVDAILVAPVVATGWDEVLQEAKDAEIPVILLDRKVDASDDLYMTAVTSDTVHEGNVAGKWLVDTVAGKPCNVVELQGTTGSSPAIDRKKGFEDAIAGHDNLKIVRSQTGDFTRTKGKEVMESFLKAEDGGKNICALYAHNDDMAVGAIQAIKEAGLKPGTDILVVSIDAVPDIFQAMAAGEANATVELTPNMAGPAFDALDAFRKDGTTPPKWIQTESKLYTQADDPAKVYEEKKGLGY*