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SCNpilot_expt_1000_bf_scaffold_2802_curated_12

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4943..5797)

Top 3 Functional Annotations

Value Algorithm Source
Dipeptide transport ATP-binding protein DppD n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EN30_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 284.0
  • Bit_score: 535
  • Evalue 4.10e-149
  • rbh
ABC-type dipeptide/oligopeptide/nickel transport system ATPase component DppD {ECO:0000313|EMBL:EYR80448.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 284.0
  • Bit_score: 535
  • Evalue 5.70e-149
dppD; dipeptide ABC transporter ATP-binding protein DppD; K12371 dipeptide transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 284.0
  • Bit_score: 464
  • Evalue 2.10e-128
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 855
ATGTCGCTTCTCGAAATCAAGAACCTCTCCGTCGAGTTCCAGACGGCATCCGGTCCCTTCCGCGCCGTGGACGGCGTATCGCTCAAGGTCGACGAGGGCGAAGTGCTCGCCATCGTCGGCGAATCCGGCTCGGGCAAGTCCGTCTCCATGCTCGCCGCCATGGGCCTCCTGCCCTGGACGGCGAAGGTGACGGCGGATGTCCTCACCTTCAACGGCCGCGACATGAAGGCCATGTCGGATGCCGAGCGGCGCAGGATCATCGGCAAGGATATCGCCATGATCTTCCAGGAGCCGATCGCCAGCCTCAATCCGTGCTTCACGGTCGGCTACCAGATCGAGGAAGTGCTGCGCATCCACACGGACCTCAATCGCAAGGCGCGCCGCGACCGGGCGATCGAGCTGTTCCAGCTGGTGGGCATTCCGAACCCGGAAGAGCGCCTCGGCCACTATCCGCACCAGATGTCGGGCGGCCAGTGCCAGCGCGTGATGATCGCGACCGCGCTTGCCTGCAATCCGAAGCTTCTCATCGCCGACGAGCCGACCACCGCGCTCGACGTGACGATCCAGAAGCAGATCCTCGACCTCCTGATGAAGCTGCAGGCCGAACACGGCATGGGCCTCATCATCATCACCCATGACATGGGCGTCGTCGCCGAAACCGCCGACCGCGTCATCGTGCAGTACAAGGGCCGCCAGATCGAGGAGGCCGACGTGCTCTCGCTCTTCTCGGCGCCGAAGAGCGTCTACACCAGGGCGCTTCTTTCGGCCCTGCCGGAAAATGCCACCGGCGGCCGCCTGCCGACGATCACCGAAAAGCTGACCGACGCCGAGATTTTCGCAGGAGCCCTCCGATGA
PROTEIN sequence
Length: 285
MSLLEIKNLSVEFQTASGPFRAVDGVSLKVDEGEVLAIVGESGSGKSVSMLAAMGLLPWTAKVTADVLTFNGRDMKAMSDAERRRIIGKDIAMIFQEPIASLNPCFTVGYQIEEVLRIHTDLNRKARRDRAIELFQLVGIPNPEERLGHYPHQMSGGQCQRVMIATALACNPKLLIADEPTTALDVTIQKQILDLLMKLQAEHGMGLIIITHDMGVVAETADRVIVQYKGRQIEEADVLSLFSAPKSVYTRALLSALPENATGGRLPTITEKLTDAEIFAGALR*