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SCNpilot_expt_1000_bf_scaffold_2803_curated_17

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12008..12619)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus assembly PilZ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CJG6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 203.0
  • Bit_score: 362
  • Evalue 2.60e-97
  • rbh
Type IV pilus assembly PilZ {ECO:0000313|EMBL:EYR80960.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 203.0
  • Bit_score: 362
  • Evalue 3.60e-97
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 74.9
  • Coverage: 203.0
  • Bit_score: 306
  • Evalue 6.90e-81
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGTACTCTTTCCAGCAAGCATCGCCCGCCGCCCGGAAGCCGCAGCCCGACCAGCGCGCCTTCCAGCGCGTATCGGTAAACCTGTCGGGCCGGCTGATGCTCGCAAGCCATGAAGAATTCGATTGCACCGTCCTCGACATGTCGCCGGGCGATGCGAGCTTCGTCTGCGCGGCGCGCCCCAAGATGGGCGAGCGCATCATCGCCTATATCGACCATGTGGGCCGCATCGAGGGCACCGTCGCGCTTCTCAACGCGGACGGCTTCGCAATCCAGCTCAACGCGACGGACCGCAAGCGGGAAAAGCTCGCGGCCCAGCTCACCTGGATCGCCAACAAGCATGAGCTCGGCCTGCCGGAAGACCGCCGCCACGACCGCCTCACCCCGCGCAACACCCGCACCGACCTGACGCTGGACGACGGCCGGCGCTATCCCTGCCGCATCATCGACCTTTCGCTTTCCGGTGCGGCCGTCGACATCGACGTGCGCCCGGCGCTCGGAACCGCCGTCCAGCTCGGCCACATGAAGGGCCGCGTCGTGCGTCACTTCCAGGAGGGCGTTGCGATCGAATTCTCCTCGGTCCAGTCGAAGGAAGCGCTGACCGTCTTCCTGTAG
PROTEIN sequence
Length: 204
MYSFQQASPAARKPQPDQRAFQRVSVNLSGRLMLASHEEFDCTVLDMSPGDASFVCAARPKMGERIIAYIDHVGRIEGTVALLNADGFAIQLNATDRKREKLAAQLTWIANKHELGLPEDRRHDRLTPRNTRTDLTLDDGRRYPCRIIDLSLSGAAVDIDVRPALGTAVQLGHMKGRVVRHFQEGVAIEFSSVQSKEALTVFL*