ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2803_curated_18

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(12753..13397)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTR0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 210.0
  • Bit_score: 331
  • Evalue 5.20e-88
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR80961.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.6
  • Coverage: 210.0
  • Bit_score: 331
  • Evalue 7.20e-88
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 216.0
  • Bit_score: 114
  • Evalue 5.30e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGCAGACCAAGGCCGCGACGGCACTTTACGACTATTGGGCACGCCAGCGCGGCGAGCGCGCCGTGCCGCTGCGCAGCGCCATCGAGCCCGCCGACATCGCGGCGATCCTGCCCGACGTGTTCATCCTCGAAGACGGCCGCCTGCACGCTCCGCGCTTCCGGCTGGCCGGCACGCGGCTTTGCGCGCAGTTCGCCCGGGAACTCAAGGGCTCGGATTTCGACGCGCTGTTTGCACCGGACCAGCGCGTCCGCGTCGCGCGGATCGCCGAGAACGTCATGGCGCAGGCCGCACCCGCCATCATGCATGTCCAGCTCGTCGACGGCACGCTGGAGACGACGGAGGCGGAAATCGCGCTGCTGCCGCTCGCCACCAGAGGCAGGACGGCCGACCGCATCATCGGCACCTTCGCGCCCCTGCCCGGCCAGCGCCCGCCGCTATCCGCCTTCCGCTATGCCACGCTCGGCGCGCTCTCGGTCATCGATCCCGAACGCCGCAGCGATCCCGCCGCCAACCGGCCGTCGATCCCCATGCCGACCTCGATCATGGCCATGCGCCCGGCCGGCCTCGGCCAGACGGTCAGCCGGGTCATGCACCTGCGCATCTTCGAGGGCGGCCGGCAGGCCGGCGAGCCGCAGGAACGCTAG
PROTEIN sequence
Length: 215
MQTKAATALYDYWARQRGERAVPLRSAIEPADIAAILPDVFILEDGRLHAPRFRLAGTRLCAQFARELKGSDFDALFAPDQRVRVARIAENVMAQAAPAIMHVQLVDGTLETTEAEIALLPLATRGRTADRIIGTFAPLPGQRPPLSAFRYATLGALSVIDPERRSDPAANRPSIPMPTSIMAMRPAGLGQTVSRVMHLRIFEGGRQAGEPQER*