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SCNpilot_expt_1000_bf_scaffold_7381_curated_1

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1..921

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:EYR81700.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EYR81700.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 305.0
  • Bit_score: 601
  • Evalue 9.10e-169
cytochrome C oxidase n=1 Tax=Kaistia granuli RepID=UPI000373B191 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 312.0
  • Bit_score: 561
  • Evalue 4.40e-157
  • rbh
cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 307.0
  • Bit_score: 534
  • Evalue 2.40e-149
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
AACCTCGCCGTGCCGGTCTCCTTCGGTCATGCGAAAAGCTATTCGCTGTTCTCCGGCGTGCAGGACGCCATGACGCAATGGTGGTACGGCCACAACGCCGTCGCCTTCTTCCTGACCTCCGGCTTCCTCGGCATGATGTACTATTACCTGCCCAAGCGCGCCGAGCGGCCGATCTTCTCCTACCGGCTCTCCATCATCAGCTTCTGGGGAATCACCTTCATGTATATGTGGGCGGGCGCCCACCACCTGCACTACACCGCCCTGCCGCAATGGGTGCAGACGCTCGGCATGACCTTCTCCATCGTGCTGCTCGTGCCCTCCTGGGCGTCTGCCGGCAACGCGCTGGCGACGCTCAACGGCGCCTGGCACAAGGTGCGCGACGACGCGACGCTGCGCTTCATGATGGTCGCCGCCGTCTTCTACGGCCTCTCGACCTTCGAGGGCTCGTTCATGGCGATCCGCGCCGTCAACTCGCTCTCGCACTATACCGACTGGACCGTCGGCCATGTCCATGCCGGCGCGCTCGGCTGGGTGGCGATGATCACCTTCGGCTCGCTCTACGCCCTCGTGCCGTGGATGTGGAAGACGGAGCGCATGTATTCGCCGAGGCTCATCGAGGTGCATTTCTGGCTCGCGCTGGCCGGCACCGTCGTCTACGTCTTCGCCATGTGGAATTCGGGCATCATCCAGGGCCTGATGTGGCGCACCTACAATGATAGCGGCACGCTCGCCTATTCCTTCATCGACAGCCTGGTCGCCATGCATCCCTACTATATCGCCCGCGCCTTCGGCGGCCTGCTGTTCCTCACCGGCGCGGTGGTCTGCTGCATCAATGTCGGCATGACGATCCGCATGGCGCGCCATGCGGTGAAGGCCGGGGCGGGCGGCGACGTTCCCGTCCTCGCACCGGCGGGAGAATGA
PROTEIN sequence
Length: 307
NLAVPVSFGHAKSYSLFSGVQDAMTQWWYGHNAVAFFLTSGFLGMMYYYLPKRAERPIFSYRLSIISFWGITFMYMWAGAHHLHYTALPQWVQTLGMTFSIVLLVPSWASAGNALATLNGAWHKVRDDATLRFMMVAAVFYGLSTFEGSFMAIRAVNSLSHYTDWTVGHVHAGALGWVAMITFGSLYALVPWMWKTERMYSPRLIEVHFWLALAGTVVYVFAMWNSGIIQGLMWRTYNDSGTLAYSFIDSLVAMHPYYIARAFGGLLFLTGAVVCCINVGMTIRMARHAVKAGAGGDVPVLAPAGE*