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SCNpilot_expt_1000_bf_scaffold_7381_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 924..1658

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTL8_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 243.0
  • Bit_score: 428
  • Evalue 6.00e-117
  • rbh
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EYR81701.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.8
  • Coverage: 243.0
  • Bit_score: 428
  • Evalue 8.50e-117
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 244.0
  • Bit_score: 374
  • Evalue 3.30e-101
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGAAGGAATTCTTCCACCGCAAGCTCGAGCGCAATGCCATCGGCTTNNNNNNNNNNNNNNNNNNNGTCGCCTCCATCGGCGGCCTCGTCGAGATCGCCCCGCTCTTCACCATCCACGAGACGGTGGAGGACGCGCCGGACATGCGGCTCTACACGCCGCTGGAGCTGGCCGGCCGCAACATCTACATCCGCGAGGGCTGTTACGCCTGTCATTCGCAGATGATCCGCACGCTGCGCGACGAGGTGGAGCGCTACGGCCCCTATTCGCTCGCCGGGGAATCGAAATACGACCCCCCGAAGCTCTGGGGCTCCAAGCGCACCGGGCCGGACCTTGCCCGCCTCGGCGGCAAGTATTCCGACGCCTGGCACGTCGCCCACCTGATGAACCCGCGCGACGTGGTGCCGGAATCGGTGATGCCGCGCTACGGCTGGCTGAAGACCAACGCGCTGAGGATCGACGATCTCGGCGAGCACCTTTCCGCCCAGCGCAAGGTCGGCGTTCCCTATACGGACGAGATGATCGCGAACGCCACCGCGGACGCCCGCGGCCAGGCGAACCCGGACGGCAACGAGGCCGCCGGCGTCGGCGAGCGCTACGGCGAGAAGACGAACGTGCGCGCCTTCGACGGAAATCCGGGCCTGCTGACAGAGATGGACGCGCTCGTCGCCTATCTCCAGATCGTCGGCCAGCTCACGGCGGCCGCCCACCAGGAAACCGCGGCAAAGGAGGAATAG
PROTEIN sequence
Length: 245
MKEFFHRKLERNAIGXXXXXXXVASIGGLVEIAPLFTIHETVEDAPDMRLYTPLELAGRNIYIREGCYACHSQMIRTLRDEVERYGPYSLAGESKYDPPKLWGSKRTGPDLARLGGKYSDAWHVAHLMNPRDVVPESVMPRYGWLKTNALRIDDLGEHLSAQRKVGVPYTDEMIANATADARGQANPDGNEAAGVGERYGEKTNVRAFDGNPGLLTEMDALVAYLQIVGQLTAAAHQETAAKEE*