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SCNpilot_expt_1000_bf_scaffold_7381_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1661..1831

Top 3 Functional Annotations

Value Algorithm Source
Cbb3-type cytochrome oxidase, subunit 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY77_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.1
  • Coverage: 56.0
  • Bit_score: 101
  • Evalue 2.30e-19
Cbb3-type cytochrome oxidase, subunit 3 {ECO:0000313|EMBL:EYR81702.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 56.0
  • Bit_score: 101
  • Evalue 3.20e-19
cbb3-type cytochrome oxidase subunit; K00407 cytochrome c oxidase cbb3-type subunit IV similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 54.0
  • Bit_score: 86
  • Evalue 3.20e-15

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGGAAGCCGATCACAACACCGTCGTCGCCTTCGCCAAGAGCTGGGGCCTTTTCTACCTCATCGCGATGGCCGCGGGCGTGCTGATCTACGCGCTGTGGCCCGGCAACCGGAAGCGCTTCAACCGCGCCAAGAAGAGCATTCTCGACAAAGACGACCGGCCAAAGGACTAG
PROTEIN sequence
Length: 57
MEADHNTVVAFAKSWGLFYLIAMAAGVLIYALWPGNRKRFNRAKKSILDKDDRPKD*