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SCNpilot_expt_1000_bf_scaffold_7381_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 1835..2713

Top 3 Functional Annotations

Value Algorithm Source
Cbb3-type cytochrome c oxidase subunit FixP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CP42_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 83.9
  • Coverage: 292.0
  • Bit_score: 515
  • Evalue 4.50e-143
  • rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 292.0
  • Bit_score: 515
  • Evalue 6.30e-143
cbb3-type cytochrome oxidase, subunit CcoP similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 291.0
  • Bit_score: 371
  • Evalue 3.30e-100
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 879
ATGGCAACCGAGAGACGCGATCCCGCCACCGGACGGGCGACCACCGGGCATGAATGGAACGGCATCGAGGAGCTGGAGACGCCGATCCCGCGCGTCGTCATCTTCTTCCTGACGGTCACCACGCTGTTTGCCATCGGCTACTGGATTCTGATGCCGGCCTGGCCGCTCGGCGTGACCTATACGAAGGGACTGCTCGGCATCGACCAGCGCGCCGTCGTGACGAAGCAGGTCGAGGACGCCGCCGCGACCCGCGCGGTCTGGACCGGCCGCATCGCCGAGGCGAGCCTTGAGGACATCGCCGCCGATCCCGACCTGATGAACCATGTGCGCGAGACGGGCCGCACGCTCTTCATCGACAATTGCGCCGCCTGCCACGGCACGCGCGGCACCGGCGGGCCGGGCTTCCCCAACCTTGCCGCCAGGGCCTGGCTCTGGGGCGGCGAGCCGGACACCATCGCCGAGACGATCCGCATCGGCATCAACGCCACCAACGAGGACACGCGCGTCTCGCAGATGATGGCCTTCGGGCGCGACGGCGTGCTCGACGACGGGCAGGTGCGCGCGGTCGCCGCCTATGTCCGCTCGCTCTCGGACCTGCCGATGGGGGCTGGCGACAAGGCGATGGTCGAGGACGGCAGGCAGGTCTTCGCCGACAATTGCGTCGCCTGCCACGGCGAGGACGGGCATGGCAGCACGGATGTCGGTGCTCCGAACCTTGCCGACGCGACATGGATCTACGGCAGCGACGCGCAGACCGTCTTCACCACGATCTATTCCGGGCGGCAGGGCCACATGCCGCACTGGGAGGGCCGGCTCTCGCCGGTCGACATCAAGATCCTGGCGCTCTATGTCGGCACGCTCGGGGAGGTCGCCCGATGA
PROTEIN sequence
Length: 293
MATERRDPATGRATTGHEWNGIEELETPIPRVVIFFLTVTTLFAIGYWILMPAWPLGVTYTKGLLGIDQRAVVTKQVEDAAATRAVWTGRIAEASLEDIAADPDLMNHVRETGRTLFIDNCAACHGTRGTGGPGFPNLAARAWLWGGEPDTIAETIRIGINATNEDTRVSQMMAFGRDGVLDDGQVRAVAAYVRSLSDLPMGAGDKAMVEDGRQVFADNCVACHGEDGHGSTDVGAPNLADATWIYGSDAQTVFTTIYSGRQGHMPHWEGRLSPVDIKILALYVGTLGEVAR*