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SCNpilot_expt_1000_bf_scaffold_7381_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_7381_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..921
DNA (921bp) protein (307aa)
Cytochrome c oxidase subunit 1 {ECO:0000313|EMBL:EYR81700.1}; EC=1.9.3.1 {ECO:0000313|EMBL:EYR81700.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cytochrome C oxidase n=1 Tax=Kaistia granuli RepID=UPI000373B191 rbh
cbb3-type cytochrome c oxidase subunit I (EC:1.9.3.1); K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] rbh
SCNpilot_expt_1000_bf_scaffold_7381_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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924..1658
DNA (735bp) protein (245aa)
Cytochrome c oxidase, cbb3-type, subunit II n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTL8_9RHIZ rbh
Cytochrome c oxidase, cbb3-type, subunit II {ECO:0000313|EMBL:EYR81701.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cbb3-type cytochrome c oxidase subunit II; K00405 cytochrome c oxidase cbb3-type subunit II rbh
SCNpilot_expt_1000_bf_scaffold_7381_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1661..1831
DNA (171bp) protein (57aa)
Cbb3-type cytochrome oxidase, subunit 3 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CY77_9RHIZ
Cbb3-type cytochrome oxidase, subunit 3 {ECO:0000313|EMBL:EYR81702.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cbb3-type cytochrome oxidase subunit; K00407 cytochrome c oxidase cbb3-type subunit IV
SCNpilot_expt_1000_bf_scaffold_7381_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1835..2713
DNA (879bp) protein (293aa)
Cbb3-type cytochrome c oxidase subunit FixP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CP42_9RHIZ rbh
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
cbb3-type cytochrome oxidase, subunit CcoP rbh
SCNpilot_expt_1000_bf_scaffold_7381_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2710..2907
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C8A8_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EYR81704.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SCNpilot_expt_1000_bf_scaffold_7381_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2922..3707
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5ER66_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:EYR81705.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
putative transmembrane protein rbh
SCNpilot_expt_1000_bf_scaffold_7381_curated_7
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3704..4177
DNA (474bp) protein (158aa)
SEC-independent protein translocase protein TatC n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTM3_9RHIZ
SEC-independent protein translocase protein TatC {ECO:0000313|EMBL:EYR81706.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
SEC-independent protein translocase protein TatC; K06886 hemoglobin
SCNpilot_expt_1000_bf_scaffold_7381_curated_8
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4326..4637
DNA (312bp) protein (104aa)
LrgA family protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C670_9RHIZ
LrgA family protein {ECO:0000313|EMBL:EYR79248.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
LrgA protein
Displaying 8 items

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