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SCNpilot_expt_1000_bf_scaffold_7933_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 3340..3942

Top 3 Functional Annotations

Value Algorithm Source
2-oxoglutarate dehydrogenase E1 component SucA {ECO:0000313|EMBL:EYR79707.1}; EC=1.2.4.2 {ECO:0000313|EMBL:EYR79707.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 200.0
  • Bit_score: 401
  • Evalue 9.10e-109
MFS transporter n=1 Tax=Rhizobium meliloti RepID=UPI000379DDCC similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 200.0
  • Bit_score: 400
  • Evalue 8.50e-109
  • rbh
sucA; 2-oxoglutarate dehydrogenase E1 component (EC:1.2.4.2) similarity KEGG
DB: KEGG
  • Identity: 97.0
  • Coverage: 200.0
  • Bit_score: 399
  • Evalue 5.90e-109
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGCAGGTCGCCAATGTCACGACGCCGGCGAACTACTTCCACATCCTGCGCCGCCAGGTGAAGCGCGACTTCCGCAAGCCGCTGATCATGATGACGCCGAAGTCGCTGCTGCGCCACAAGCGTGCGGTCTCCTCGCTGTCGGAAATGGCGGGCGAAAGCTCGTTCCACCGCCTCTTGTGGGACGACGCCGAAGTGATCAAGGACGGCCCGATCAAGCTCCAGAAGGACGCCAAGATCCGCCGCGTGGTGATGTGCTCGGGCAAGGTCTACTACGACCTTCTGGAAGAGCGCGAGAAGCGCGGCATCGACGACGTCTATCTCCTGCGCCTGGAACAGCTCTATCCGTTCCCGGCCAAGGCGCTGATCAACGAGCTGTCGCGCTTCCGCAACGCGGAGATGGTCTGGTGCCAGGAAGAGCCCAAGAACATGGGCGCCTGGGCCTTCATCGATCCCTATCTGGAATGGGTGCTGGCGCATATCGACGCCAAGTACCAGCGCGTGCGCTATACCGGCCGTCCGGCCGCCGCCTCGCCGGCGACGGGCCTGATGTCCAAGCATCTCTCGCAGCTTGCCGCCTTCCTCGAGGACGCGCTGGGCGGTTGA
PROTEIN sequence
Length: 201
MQVANVTTPANYFHILRRQVKRDFRKPLIMMTPKSLLRHKRAVSSLSEMAGESSFHRLLWDDAEVIKDGPIKLQKDAKIRRVVMCSGKVYYDLLEEREKRGIDDVYLLRLEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWAFIDPYLEWVLAHIDAKYQRVRYTGRPAAASPATGLMSKHLSQLAAFLEDALGG*