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SCNpilot_expt_1000_bf_scaffold_7933_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 4367..5263

Top 3 Functional Annotations

Value Algorithm Source
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXK9_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.0
  • Coverage: 299.0
  • Bit_score: 554
  • Evalue 8.90e-155
  • rbh
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.0
  • Coverage: 299.0
  • Bit_score: 554
  • Evalue 1.20e-154
sucB2; dihydrolipoamide succinyltransferase (EC:2.3.1.61); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 298.0
  • Bit_score: 528
  • Evalue 1.30e-147
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGCCGCCGGCTCCGGCCGCCGCCAAGCTGCTCGCCGAAAACAACATCGCGGCCGATCAAGTCGACGGTTCCGGCAAGCGCGGCCAGGTGCTGAAGGGCGATGTCATCGCCGCCGTCGCCAAGGGCATCACGGCCTCCGCCGCTGCCGCCGAGCCGGTCAAGGCTGCCGCCCGCCCGGCCTCCTCGGAAGCCGACGCGCCGCGCGAGGAGCGCGTGAAGATGACGCGCCTGCGCCAGACCATCGCAAGGCGCCTCAAGGATGCGCAGAACACCGCCGCCATGCTGACCACCTACAACGAGGTGGACATGAAGGCCGTGATGGACCTGCGCAGCCGCTACAAGGACATCTTCGAGAAGAAGCACGGCGTGAAGCTCGGCTTCATGGGCTTCTTCACCAAGGCCGTCACCCACGCGCTGAAGGAACTGCCGGCCGTCAACGCCGAGATCGACGGCACCGACATCATCTACAAGAACTATTGCCATGTCGGCGTCGCCGTCGGCACGGACAAGGGCCTCGTGGTCCCGGTCGTGCGCGATGCCGACCAGATGTCGATCGCCGAGATCGAGAAGGAAATCGGCCGCCTCGGCAAGCTCGCCCGTGACGGCGCGCTGTCGATGGCCGACATGCAGGGCGGCACCTTCACCATCTCCAACGGCGGCGTCTACGGCTCGCTGATGTCCTCGCCGATCCTCAACGCCCCGCAGTCGGGCATCCTCGGCATGCACAAGATCCAGGAGCGCCCGGTCGTCGTCGGCGGCCAGATCGTCATCCGTCCGATGATGTATCTGGCGCTGTCCTACGACCACCGCATGGTCGACGGCAAGGAAGCCGTGACCTTCCTGGTGCGCGTCAAGGAAAGCCTGGAAGACCCGGAACGCCTCGTTCTCGATCTCTGA
PROTEIN sequence
Length: 299
MPPAPAAAKLLAENNIAADQVDGSGKRGQVLKGDVIAAVAKGITASAAAAEPVKAAARPASSEADAPREERVKMTRLRQTIARRLKDAQNTAAMLTTYNEVDMKAVMDLRSRYKDIFEKKHGVKLGFMGFFTKAVTHALKELPAVNAEIDGTDIIYKNYCHVGVAVGTDKGLVVPVVRDADQMSIAEIEKEIGRLGKLARDGALSMADMQGGTFTISNGGVYGSLMSSPILNAPQSGILGMHKIQERPVVVGGQIVIRPMMYLALSYDHRMVDGKEAVTFLVRVKESLEDPERLVLDL*