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SCNpilot_expt_1000_bf_scaffold_7933_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 6924..7676

Top 3 Functional Annotations

Value Algorithm Source
Putative oxidoreductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CGH6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 250.0
  • Bit_score: 445
  • Evalue 4.90e-122
  • rbh
Putative oxidoreductase {ECO:0000313|EMBL:EYR79712.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 250.0
  • Bit_score: 445
  • Evalue 6.90e-122
ygfF; oxidoreductase YgfF (EC:1.-.-.-) similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 250.0
  • Bit_score: 365
  • Evalue 1.50e-98
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGAGCGAGGCGCCCGTTCTTCTCGTCACCGGCGGCAGCCGCGGTATCGGCGCCAGCGTCTGCCGCATGGCGGGCGTGGCCGGCTGGCAGGTCGCGGTGAACTACGTTTCCAATGTCGCGGCGGCCGAGGCGGTGGTGGCGGAGATCCGCGATGCCGGCGGCTCGGCAATCCCCGTTCAGGGCGATGTCGGCAGCGAGCTTGGCCTTGCCAATATCTTCTCGACCATCGACGGCACTTTCGGCCGGCTGGACGGCCTCGTGAACAATGCGGGCATCGTCGCCACGCCGCAGCGCGTCGACGAGATGTCGGCCGAGCGGCTGGAGCGCATGTTCGCGGTCAACGTCATGGGGTCGATCCGCTGCGCGCAGGAAGCCGTGCGCCGCATGTCGAGGCGCCATGGCGGAGAGGGCGGTTCCATCGTCAATGTCTCGTCGGTCGCCGCGCAGCTCGGCGGGGCGGGGCAATATGTCGACTACGCCGCCAGCAAGGGCGCCATCGAGAGCTTCACCATCGGCCTTGCCCGCGAGGTCGCGGCCGAGGGCATCAGGGTCAATCTCGTGCGCCCCGGCATCATCGACACCGAGATCCACGCTTCCGGCGGCCTGCCGGACCGGGCGCGCGACATGGCCTCGCTGATCCCGATGCACCGGCCGGGCACGGCCGACGAGGTCGCCCATTCCATTCTCTATCTTCTCTCCGACGCGGCATCCTATGTGACGGGGGCCGCCCTCAACGTCCGCGGCGGCCGCTAG
PROTEIN sequence
Length: 251
MSEAPVLLVTGGSRGIGASVCRMAGVAGWQVAVNYVSNVAAAEAVVAEIRDAGGSAIPVQGDVGSELGLANIFSTIDGTFGRLDGLVNNAGIVATPQRVDEMSAERLERMFAVNVMGSIRCAQEAVRRMSRRHGGEGGSIVNVSSVAAQLGGAGQYVDYAASKGAIESFTIGLAREVAAEGIRVNLVRPGIIDTEIHASGGLPDRARDMASLIPMHRPGTADEVAHSILYLLSDAASYVTGAALNVRGGR*