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SCNpilot_expt_1000_bf_scaffold_7933_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7873..8490)

Top 3 Functional Annotations

Value Algorithm Source
IS1380 family transposase similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 150.0
  • Bit_score: 116
  • Evalue 1.30e-23
IS1380 family transposase n=3 Tax=Bacteria RepID=A1RCW9_ARTAT similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 150.0
  • Bit_score: 116
  • Evalue 4.30e-23
IS1380 family transposase {ECO:0000313|EMBL:ABM10583.1}; TaxID=290340 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter aurescens (strain TC1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 150.0
  • Bit_score: 116
  • Evalue 6.00e-23

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Taxonomy

Arthrobacter aurescens → Arthrobacter → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 618
ATGGTGGTGGCGTCGCCCCCCTTGACCGGCTCGAAGGTCACCTTCGCGCCGGAGCCGGACTTCGTAACGCCCGTCACCTTGGCGCCGAGCTTGAAGTCCATGCCTTGCTTGGCGAGCATGCGCTGGAACTGCTTGGAGACCTCGCCGTCCATGCCGCCGAGGATGGCGTCGAGATATTCGACGACCGTGACCTTGGCGCCGAGGCGGGCCCAGACCGAGCCGAGCTCAAGGCCGATCACACCGCCGCCGACGACCACCAGATGGCCCGGCACCTTGTCGAGCGCGATGCCACCCGTCGAGGAGACGATGACCTTCTCGTCGATCTCGACCGGAACGCCCGGAATGCCCGCGACGTCCGACCCCGTGGCGATCACGATGGCCTTCGTCTCCAGGACCTGTTCCTCGCCCTTGTCGCTGGTGACGGAGACCTTGCCCGCGCCGAGCACCTTGCCGGTGCCCTGGATGCCGTCGATCTTGTTCTTCTTGAAGAGGAAGGCGACGCCGTCGACATTCGACTTCACGGTCGCATCCTTGTGCGCCATCATCTTCGACAGGTTCAGCGTGGGCTTCACGCCCTCGATGCCGAGCGCGTCCATGCCGTGGGCGGCATGGCTGTAG
PROTEIN sequence
Length: 206
MVVASPPLTGSKVTFAPEPDFVTPVTLAPSLKSMPCLASMRWNCLETSPSMPPRMASRYSTTVTLAPRRAQTEPSSRPITPPPTTTRWPGTLSSAMPPVEETMTFSSISTGTPGMPATSDPVAITMAFVSRTCSSPLSLVTETLPAPSTLPVPWMPSILFFLKRKATPSTFDFTVASLCAIIFDRFSVGFTPSMPSASMPWAAWL*