ggKbase home page

SCNpilot_expt_1000_bf_scaffold_7933_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 8632..9078

Top 3 Functional Annotations

Value Algorithm Source
Dihydrolipoyl dehydrogenase Lpd n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EXL4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 98.6
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 7.00e-76
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.6
  • Coverage: 148.0
  • Bit_score: 290
  • Evalue 9.80e-76
lpdA; dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 148.0
  • Bit_score: 287
  • Evalue 3.20e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGCTCGCCCACAAGGCGGAGGACGAGGGCGTCGCCGTCGCCGAGATCCTTGCCGGCCAGGCCGGCCATGTGAACTACGACGTCATTCCGGGCGTCGTCTACACCCAGCCGGAAGTCGCCTCCGTCGGCAAGACGGAAGAGGAGCTGAAGGCCGCCGGCATCGCCTACAAGGTCGGCAAGTTCCCCTTCACCGCCAACGGCCGCGCCCGCGCCATGCTGGCGACGGACGGCTTCGTGAAGGTGCTGGCCGACAAGGAGACGGACCGCGTTCTCGGCGTCCACATCGTCGGCTTCGGCGCCGGCGAGATGATCCACGAGGCGGCCGTCCTCATGGAATTCGGCGGCTCCTCCGAAGACCTCGGCCGCACCTGCCACGCGCACCCGACCATGTCGGAAGCCGTCAAGGAAGCCGCGCTCGCGACCTTCGCCAAGCCGATCCATATGTGA
PROTEIN sequence
Length: 149
MLAHKAEDEGVAVAEILAGQAGHVNYDVIPGVVYTQPEVASVGKTEEELKAAGIAYKVGKFPFTANGRARAMLATDGFVKVLADKETDRVLGVHIVGFGAGEMIHEAAVLMEFGGSSEDLGRTCHAHPTMSEAVKEAALATFAKPIHM*