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SCNpilot_expt_1000_bf_scaffold_6727_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(1059..1916)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00037EA5B6 similarity UNIREF
DB: UNIREF100
  • Identity: 80.2
  • Coverage: 247.0
  • Bit_score: 391
  • Evalue 9.50e-106
  • rbh
potA4; polyamine ABC transporter ATP-binding protein PotA (EC:3.6.3.31); K02052 putative spermidine/putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 265.0
  • Bit_score: 379
  • Evalue 9.00e-103
  • rbh
Polyamine ABC transporter, ATP-binding protein PotA-4 {ECO:0000313|EMBL:ADE86181.1}; EC=3.6.3.31 {ECO:0000313|EMBL:ADE86181.1};; TaxID=272942 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 265.0
  • Bit_score: 379
  • Evalue 4.00e-102

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Taxonomy

Rhodobacter capsulatus → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 858
ATGACCTCCAACCCGATTGTAACGCTTGCCGGCGTTGCGAAACGATATGGCGCATTCCTCGCCCTCCAGGAGACCGACCTTGCGATTGCCGAGGGCGAGTTCGTGACCCTGCTCGGCCCCTCGGGCTGCGGCAAGACGACGACGCTCAGGCTGATCGGCGGCTTCGAGCAGGCGAGCGCCGGCCGCATCGCCATCGCCGGCCAGGACGTGACGGACAGCCCGCCCTATCGCCGGCCGGTCAACACGGTCTTCCAGGACTATGCGCTGTTTCCGCATATGAGCGTGGCGGAGAATATCGGCTACGGCCTTTCGGTGAAATCCGGCCGGGTGGCGAAGGCCGAGCGGGACAGGCGCGTCGCCGAGGCGCTGGCCATGGTCGGGCTGGAGGGCAAGGCCGGCATGCGGCCCGGCGCCCTCTCGGGCGGCCAGCGCCAGCGCGTGGCGATGGCGCGCGCCATCGTGCGCCGCCCGCGCGTGCTGCTGCTCGACGAGCCGCTTTCGGCACTCGACGTGAAGCTGCGCGAGGGCATGCAGGTGGAGCTGAAGCGCCTGCACCGCGAGCTCGGCATCACCTTCCTCATGGTCACGCACGACCAGAACGAGGCACTGGCGCTCTCCGACCGCATTGTCGTCATGAAAGAGGGCCGCATCGCGCAGGTCGGCTCGCCGACGGATCTCTACGACCGTCCCGCCAGCCCCTATGTCGCTGACTTCATCGGCGGGGCGAACCTGGCGGATGCCGAGGCCCTCGGCGNNNNNNNNNNNNNNNNNNNGGCCGCCATGCCAGCCTCGGCCTTCGCGCCGAGCACCTGCATGTCACGGCGGCCGGGGCGGAAAACACGCTCGCCTGCACCGTGA
PROTEIN sequence
Length: 286
MTSNPIVTLAGVAKRYGAFLALQETDLAIAEGEFVTLLGPSGCGKTTTLRLIGGFEQASAGRIAIAGQDVTDSPPYRRPVNTVFQDYALFPHMSVAENIGYGLSVKSGRVAKAERDRRVAEALAMVGLEGKAGMRPGALSGGQRQRVAMARAIVRRPRVLLLDEPLSALDVKLREGMQVELKRLHRELGITFLMVTHDQNEALALSDRIVVMKEGRIAQVGSPTDLYDRPASPYVADFIGGANLADAEALGXXXXXXXAAMPASAFAPSTCMSRRPGRKTRSPAP*