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SCNpilot_expt_1000_bf_scaffold_6727_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4478..5647)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00036449DB similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 374.0
  • Bit_score: 515
  • Evalue 4.60e-143
  • rbh
PAS domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 381.0
  • Bit_score: 306
  • Evalue 1.00e-80
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:ETE53120.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus Y262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.5
  • Coverage: 381.0
  • Bit_score: 306
  • Evalue 4.50e-80

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Taxonomy

Rhodobacter capsulatus → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1170
ATGAAAGTACACGCGCCCGGCACCGCCAATTTCGATGCCCTGCTGGTCGACTGGATCGACGGCGAAGGCCGTATCTGCGCCGTCAACGCGAGAGAGGCGCACGAGCTTGCCATCGCGCTTGGGCACGGTGAAAGCGTGCCGCTGGAGCGCATCTACAGCAGCACCTCGGCGCAGATGCTGCGCGCCATCGCCCGCGACGGCCAGCCGTTCGTGTCCGGGCTCGCCGTCTGGGTGAACTCGCCGCAATATAGCGAGATCCCCATGATCGCCACCGTGGTCTCCGATCCGGGCCGCGGGCTTGCCGTCATCAAGCAGCCGTTGCCCGAAAGCGTGCTCGGCATCGGGCCGGAGCTCGCCGAGCGGGTGGAAATCCTCTCGCAGATGATCGGCGCGGCGACGGAAGCGTGCTGGTGCATCGAATTCCTCGAACCGGTCGATACGGCGCTCGCCGAGGACGAGATCGTCGAGCGCATCTTCTCCAACCAGAGCCGCTGGCGCGCCTGCAACGAGGCGATGGCCCGGCTCTACCGGGTACCCGAAGGGCTCGATTTCAACATCCAGCCGGTCTCGCGCTATTTTCCGGCGACCGAGATCAACCGCCGCATGGTGCGCGACCTCGTGCGCTCCGGCTACCGCCTCGACCGCGCCGCCGCCGTCGACCGCCGGCACGACGACAGTGAAATGCTGGTCGAGAACGATTTCCGCGCCGCGATCAAGGACGGTTTCCTCGTGCGGCTCTGGGGCACGACGCGCGATATCGGCGCGCACCGCCAGCGCGAGCAGCAGCTCGCCGACCGGGCGGACACGATGCAGGACATCCTGAGCGCCGCGCCGGACCCGATCCTCGTCATCTCCGAGGACGGCCTTCTGCTGGCGACCAACCCTGCGGCGGAGAGCGTCTGGGGGCGCACCGCCGAGCAGGTGCTCGGCCGGCCGCTGCAGCAGTTCATCGAAACGCGCAACGCGCTCGACAAGCTCCGGCAGGCGGCCCTTGCCGGCGAGGACAGCGACGGCGAATGCGACCTTGCCGTCATCGCCGCCGATGCCAGCCGCGACGTCTGGCGCTTCCGCGCCGCGCGCATCGAGGGCGAGATGCGCCGCTACGTGCTGACCGCCCGGCGCAAGAGCCGCCGCAGGGCGCGCGGCCTTCTGCAGGAGGCCACGTCATGA
PROTEIN sequence
Length: 390
MKVHAPGTANFDALLVDWIDGEGRICAVNAREAHELAIALGHGESVPLERIYSSTSAQMLRAIARDGQPFVSGLAVWVNSPQYSEIPMIATVVSDPGRGLAVIKQPLPESVLGIGPELAERVEILSQMIGAATEACWCIEFLEPVDTALAEDEIVERIFSNQSRWRACNEAMARLYRVPEGLDFNIQPVSRYFPATEINRRMVRDLVRSGYRLDRAAAVDRRHDDSEMLVENDFRAAIKDGFLVRLWGTTRDIGAHRQREQQLADRADTMQDILSAAPDPILVISEDGLLLATNPAAESVWGRTAEQVLGRPLQQFIETRNALDKLRQAALAGEDSDGECDLAVIAADASRDVWRFRAARIEGEMRRYVLTARRKSRRRARGLLQEATS*