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SCNpilot_expt_1000_bf_scaffold_6727_curated_5

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(3081..4481)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI00035C4E26 similarity UNIREF
DB: UNIREF100
  • Identity: 61.6
  • Coverage: 471.0
  • Bit_score: 535
  • Evalue 5.10e-149
  • rbh
Fis family sigma54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 39.4
  • Coverage: 467.0
  • Bit_score: 281
  • Evalue 4.20e-73
Uncharacterized protein {ECO:0000313|EMBL:ETE53178.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus Y262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.4
  • Coverage: 467.0
  • Bit_score: 281
  • Evalue 1.90e-72

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Taxonomy

Rhodobacter capsulatus → Rhodobacter → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1401
ATGAAATTCTACGCCAACGACCTCACCCCATCCGGCCAGCGGCGCCTGCGCCCTTCCTTCATCGACGAGCCGCAGTTCGGCGCCTTCCTCGAAGCCTTCCCCGACGGCGTGGCGCTGCTGGAGACGGACGGCACCATCAAGCTGGTCAACGGCAAGCTCGAACTGCTGCTGAACCTTGCGCGCGGCGACCTCGTCGGCTCGGATCTGGCGAAACACGCCAAGACGGCCGGCCCCCTCGTCCAGAAGCTCGCGAGCGCCCTGCGGCAGCTCAAGCGCACCGAGGTTTCCGGCACGCTCAATTCGCAGCGCAACGTCACCGCCTCCATCGGCATCCTGCGCACGCCCGACGGCGGCGCCTATGGCGCGCTGCTGACGATGCGCGAGACCGGGCGGCACAGCCGCGGCTACGAGCGCAGCGACCATTTCCGCTTCGGGGCCGAGCCCCTGCCGGCGGCCGGCGGCGGCGGCCCCGTGCTCACGCCGCGCCTCGCCACCATCGCCCGCCGGGCCGCGACCGCCATCGAGCGCGGCAGCGCCGTGCTCCTGACCGGCGAGACCGGCACGGGCAAGACGGAACTTGCCCGCTTCATCGGCAAGGCCGGCGCCTCCGATGCGCCGCCCTTCGTCCACGTCAATTGCGGCATGCTGAGCGACGCGCAGTTCGACGCGGAGATGTTCGGCATCGAGCCGGGCTCGTCGCTCGACACCTCGACGCGCGGCAAGCTCGGCTTCGTGGAGGCGGCCGACGGCGGCACGCTCTTCCTCGACCAGGTGACGGACCTTTCGCCCGTCTCGCAGATGAAGCTCGTCGCCTTTCTCGAAAGCCAGACCTTCAGCCGCCTCGGCTCGATGCAGCGGCGCAAGGCGCGCATCAGCCTCGTCCCCGCCACCAATGCCGACCTGCCGGACCTGATCTGGAGCGGCGCCTTCCGCCGCGCCCTCTATTACCGCATCGCCGTCGTGACGCTGGAGCTGCCGGCGCTGCGGGACCAGCCGGAACTGGTCGCCGCGCTGACCGAGAACGTGCTGCGGCGGCTCAATGCCGGCCGCACGCCGACGCTGCAGCTTTCCGCGGCCTTCAGCAAGCGGCTTTCCGCCCATGCCTTTCCCGGCAATGTGCGGGAGCTGACGAACATCCTCGAGCGCGCCGCGGCGAGCGCCGAGGACATGGCGCTTGCCGAGCATTTCATCGCCGCCGAGGGGGCTGCGTCACGGCCTGCCCCTGCCCGCCCGGTCGGCGATGGGGAGACATCGCCGCAGAGCTTCCGGGACCTGATGCAGGCCTTCGAAAGCTGGGTCCTGGAAAAATCCATCGCAGAGCATGGAAGCAAGAGAGGCGCCGCCAAGGCGCTCGGAATCGATATCGCCACCCTCGTCCGAAAGACAAAGCGGGCGAAATGA
PROTEIN sequence
Length: 467
MKFYANDLTPSGQRRLRPSFIDEPQFGAFLEAFPDGVALLETDGTIKLVNGKLELLLNLARGDLVGSDLAKHAKTAGPLVQKLASALRQLKRTEVSGTLNSQRNVTASIGILRTPDGGAYGALLTMRETGRHSRGYERSDHFRFGAEPLPAAGGGGPVLTPRLATIARRAATAIERGSAVLLTGETGTGKTELARFIGKAGASDAPPFVHVNCGMLSDAQFDAEMFGIEPGSSLDTSTRGKLGFVEAADGGTLFLDQVTDLSPVSQMKLVAFLESQTFSRLGSMQRRKARISLVPATNADLPDLIWSGAFRRALYYRIAVVTLELPALRDQPELVAALTENVLRRLNAGRTPTLQLSAAFSKRLSAHAFPGNVRELTNILERAAASAEDMALAEHFIAAEGAASRPAPARPVGDGETSPQSFRDLMQAFESWVLEKSIAEHGSKRGAAKALGIDIATLVRKTKRAK*