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SCNpilot_expt_1000_bf_scaffold_5731_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(4895..5887)

Top 3 Functional Annotations

Value Algorithm Source
Proline racemase {ECO:0000313|EMBL:CDX23839.1}; TaxID=69974 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium plurifarium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 330.0
  • Bit_score: 383
  • Evalue 3.20e-103
Proline racemase n=1 Tax=Mesorhizobium sp. LNJC394B00 RepID=V7FU69_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 324.0
  • Bit_score: 284
  • Evalue 1.50e-73
proline racemase protein (EC:5.1.1.4) similarity KEGG
DB: KEGG
  • Identity: 48.6
  • Coverage: 327.0
  • Bit_score: 279
  • Evalue 1.10e-72

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Taxonomy

Mesorhizobium plurifarium → Mesorhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 993
ATGATCGGCGTCGAGGCGGCTTTTCCCTATATCGACACCCATACGGCCGGGCATCCGACTCGCGCCGTCCTGGGAGGGATTCCGCCGCTTCGAGGGCGTAGCGTTCTCGAAAAGCGCGAGGACTTCGAGCGCCGCTTCGATCATCTCCGTCCCGCCCTCCTGCACGAGCCCCGCGGCCATGCAGCCATGGTGGGGCTCATTCCGGTTTCCTCCGAAGTGGCGGATTTCGGTGCGATTTTCATCTCGTCTTACGTCTATCTCGGCATGTGCGGCCACGGCACCATCGGCTTTGCCAAGACGCTGGCCTTCACGGGCGCGATTTCGCCGGTAACCGGCGACCGGTTCACGCTGGAAACACCGGCCGGCGTGGTCGATGTCCGGCTGGAATGGGACGGGGAGGGCCGTCTCGGTGCAGGCTCCTTGAAGAACGTACCCGCCTATATGGGCATCGAAGGTCTGGAGGTGGAGGTTCCGGGGCTCGGTACGATCCGCACCGACATCCTCTATTCCGGCATGTGGTATGCGATGGTGGATGCCGATCCGCTGGGGCTGGCGCTCACCCCCGAAAACACCTCGGCCGGCCTCGCGCTCGGCTGGAGGATCAAGGAATCCATTGCGAAGGCGACGGACGGGCGGCCTGAGATGCGCGGCCTTCCTGCCCCCTCGGTCCTGTTCCACAGCGATCTCGGCAAGGGGCATTCGCGTCAGTTCCTGGTGCTCGCGCCCAACAAATACGACCGTTCGCCTTGCGGCACCGGCACCTGCGCCCGAATGGCGCAGCTGCTGATGCGCGGTGAACTGTCGGAGACCGATGCCTATCGCGCCGAGAATATTTTCGGCGTGTCCTTTACCGCGGAACTCGCCGAGAAGAGCGAGACCTGCGGCACGACGGGTTATGCCGTCATCGTCCGGGGAGAGGCTCATGTCACCTCCCAGGGCACACTATACCTCGAAAAGGGTGATCCGCTTTCCGGGGGGTTCCTGAGCCGGTGA
PROTEIN sequence
Length: 331
MIGVEAAFPYIDTHTAGHPTRAVLGGIPPLRGRSVLEKREDFERRFDHLRPALLHEPRGHAAMVGLIPVSSEVADFGAIFISSYVYLGMCGHGTIGFAKTLAFTGAISPVTGDRFTLETPAGVVDVRLEWDGEGRLGAGSLKNVPAYMGIEGLEVEVPGLGTIRTDILYSGMWYAMVDADPLGLALTPENTSAGLALGWRIKESIAKATDGRPEMRGLPAPSVLFHSDLGKGHSRQFLVLAPNKYDRSPCGTGTCARMAQLLMRGELSETDAYRAENIFGVSFTAELAEKSETCGTTGYAVIVRGEAHVTSQGTLYLEKGDPLSGGFLSR*