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SCNpilot_expt_1000_bf_scaffold_5731_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7330..7650

Top 3 Functional Annotations

Value Algorithm Source
Mandelate racemase/muconate lactonizing protein n=1 Tax=Osedax symbiont Rs1 RepID=S6GCU7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 89.0
  • Bit_score: 156
  • Evalue 1.50e-35
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EPJ43531.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 89.0
  • Bit_score: 156
  • Evalue 2.10e-35
galactonate dehydratase similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 89.0
  • Bit_score: 146
  • Evalue 4.80e-33

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Taxonomy

Osedax symbiont Rs1 → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
GTGACCAGGATCGTACGCGTCAGAACAAGAGTTTGGAGCTGGAAGGGGCCGGTCGTGCCGCCGCAGCCGCATTTCTGCACCAATGCCAGCGACGTCCTCTACGAGCGCGGCGATGCCATGGGGAGCTTTCGCTTTCATCAATGGCTGACCTGCGAGGTGGAGGCCGATACGGGCGAGATCGGCATCGGCAATGCGGCCCTGGTGCCGGACTTGGTCAAGAAGGCGATCGACGGCTACTATGCCCCGCTCGTCATCGGCGAGGACCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGGGGCCGCAAGGGCGTCGGCATGA
PROTEIN sequence
Length: 107
VTRIVRVRTRVWSWKGPVVPPQPHFCTNASDVLYERGDAMGSFRFHQWLTCEVEADTGEIGIGNAALVPDLVKKAIDGYYAPLVIGEDPXXXXXXXXXPGAARASA*