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SCNpilot_expt_1000_bf_scaffold_4159_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2153..2587

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUC4_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.0
  • Coverage: 144.0
  • Bit_score: 257
  • Evalue 8.40e-66
Uncharacterized protein {ECO:0000313|EMBL:EYR78904.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.0
  • Coverage: 144.0
  • Bit_score: 257
  • Evalue 1.20e-65
peptidyl-tRNA hydrolase domain-containing protein; K15034 ribosome-associated protein similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 144.0
  • Bit_score: 243
  • Evalue 3.90e-62

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 435
ATGGCCAGCGACCCCCTCTATATCAACGGCGCGATCACGATCGCCGGCTGGGAACTGACCGAGCAATTCGTGCTGGCCGGCGGACCGGGCGGGCAGAACGTCAACAAGGTCTCGACCGCGGTGCAGCTCTTCTTCGACCTGCGCAACTCGCCCTCGCTCAGCGAGCGCATCAAGGCGAATGCCGAGAAGCTGGCCGGCCGCAAGGTCTCCAAGGATGGCGTGCTGATGATCGAGGCGAACCGCTTCCGCAGCCAGGAGCGCAACCGGGAGGATGCGCGCGAACGGTTGAAGGAACTGATCCTCAAGGCCGCCGAGCCGCCCCCGCCGCCGCGCCGCAAGACGAAGCCGACGAAGGGCTCGGTCGAACGCCGGCTCAAGGCGAAGTCGGGCCGATCGGACGTGAAACGCATGCGGGCCAAGCCCTCGGGCGAATGA
PROTEIN sequence
Length: 145
MASDPLYINGAITIAGWELTEQFVLAGGPGGQNVNKVSTAVQLFFDLRNSPSLSERIKANAEKLAGRKVSKDGVLMIEANRFRSQERNREDARERLKELILKAAEPPPPPRRKTKPTKGSVERRLKAKSGRSDVKRMRAKPSGE*