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SCNpilot_expt_1000_bf_scaffold_4159_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6684..6977)

Top 3 Functional Annotations

Value Algorithm Source
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CF07_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 97.0
  • Bit_score: 186
  • Evalue 9.40e-45
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 97.0
  • Bit_score: 186
  • Evalue 1.30e-44
hisH; imidazole glycerol phosphate synthase subunit HisH; K02501 glutamine amidotransferase [EC:2.4.2.-] similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 171
  • Evalue 1.70e-40

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 294
ATGACGCCCTCCGACCCGGAGCTGAAGATCCCGCAGATCGGCTGGAACACGCTCGACGCCAAGCGCCCGCACCCGCTCTTCGACGGCATCCCGGCGACGCTGCACGCCTATTTCGTGCATTCCTACCACCTCGCCGCGGAAAACCCGGAAGACGTGGTCGCGACCGTCGATTACGGCGGGCCGATGACCGCCTTCGTCGCCAACGGCAACAAGGCCGGCGCGCAGTTCCACCCGGAAAAGAGCCAGACGCTCGGCCTTGCCCTCATCACCAATTTCCTGCGCTGGAAACCCTAA
PROTEIN sequence
Length: 98
MTPSDPELKIPQIGWNTLDAKRPHPLFDGIPATLHAYFVHSYHLAAENPEDVVATVDYGGPMTAFVANGNKAGAQFHPEKSQTLGLALITNFLRWKP*